Gene Information

Name : Sde_0329 (Sde_0329)
Accession : YP_525805.1
Strain : Saccharophagus degradans 2-40
Genome accession: NC_007912
Putative virulence/resistance : Resistance
Product : ABC transporter related
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 410621 - 411301 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
ATGTTAAAATTACACAATATTTGCCGCACATATCGCACCAACGAAGTAGAAACCTTGGCACTGAATAATGTCAATGTAGA
AATAGCTGCGGGCGATTTCGTGGCTATTATGGGGCCGTCTGGTTGTGGAAAATCAACATTGTTAAACACCATTGGCATGT
TAGATTCACCCACCAGTGGCGATTACATATTTAATGGCGAAAATATTGCGGGCTATAGCGAATCGCAGCTGGCAAATATT
AGAAAGCGCAATATAGGCTTTATATTTCAAAACTTTAATTTAATAGATGAATTAACAGTAGAAGAAAATATAGAGCTGGC
ACTGCTCTATCACAAAATTCCAGTTGCAGAGCGAAAACAACGTGTAGCCAAAGTAATGGATAAAGTAGGTATAGCGCATA
GAGCCAAACATATGCCCAGCCAACTTTCCGGTGGTCAGCAGCAGCGGGTTGCCGTTGCGCGCGCGGTTGTGGGCAATCAG
GATGTGATATTAGCAGATGAACCAACCGGTAACTTAGATAGCGCCCACGGGCAAGAAGTAATGGAAATGCTGTTAGCACT
TAACAAAGAGGGCACTACCATCATTATGGTTACCCACAGCCCAGCCCATGCCGACTATGCAAAGCGTACCATCAATCTAT
TTGATGGAAAAATAATAACCGAAAATATGCGCGCAGCCTAA

Protein sequence : 
MLKLHNICRTYRTNEVETLALNNVNVEIAAGDFVAIMGPSGCGKSTLLNTIGMLDSPTSGDYIFNGENIAGYSESQLANI
RKRNIGFIFQNFNLIDELTVEENIELALLYHKIPVAERKQRVAKVMDKVGIAHRAKHMPSQLSGGQQQRVAVARAVVGNQ
DVILADEPTGNLDSAHGQEVMEMLLALNKEGTTIIMVTHSPAHADYAKRTINLFDGKIITENMRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-25 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sde_0329 YP_525805.1 ABC transporter related NC_012469.1.7686878. Protein 4e-52 53
Sde_0329 YP_525805.1 ABC transporter related CP001581.1.gene798.p Protein 1e-31 46
Sde_0329 YP_525805.1 ABC transporter related NC_012469.1.7686946. Protein 1e-24 45
Sde_0329 YP_525805.1 ABC transporter related NC_008702.1.4606598. Protein 2e-38 45
Sde_0329 YP_525805.1 ABC transporter related CP001581.1.gene598.p Protein 2e-27 44
Sde_0329 YP_525805.1 ABC transporter related NC_012469.1.7685735. Protein 1e-28 42