Gene Information

Name : Sde_2713 (Sde_2713)
Accession : YP_528185.1
Strain : Saccharophagus degradans 2-40
Genome accession: NC_007912
Putative virulence/resistance : Virulence
Product : protein of unknown function DUF523
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 3441469 - 3442443 bp
Length : 975 bp
Strand : -
Note : -

DNA sequence : 
ATGTGCATAGGAGGTTGTCGCGTGGAAGAAAATAAAATACCTGTAGGTATAAGCTCTTGTTTGTTGGGGGAGGAGGTTCG
CTTTAACGGCGGCCACAAGCAGTCTCGTTTCTGTTTAGATCATTTGTCTCGTGTGTTTGAGTTTCAGGGTTTTTGTCCAG
AGGTAGCGATAGGGATGGGTGTGCCGCGCGAGCCCATTCGACTTGTGGGGAGTATTGATGCGCCGCGAGCCGTTGGTACT
GTTGATGCCAGTGTAGATGTAACGGACGCGCTCGCCGCTTATGGGGATGAGATTGGTAGGCTAAGTCACTCCCTTTGCGG
GTATATTTTAATGAAAAACAGCCCTAGCTGTGGGCTGTATAGTGCAAAAGTGTATACGCCTAAAGGGGGTGTGTTGCCCG
GTAAGCATGCAGGCATTTTTGCCCGAGCGTTAAAGGCGGTAAACCCCTTGTTGCCTTTGGAAGAGGAAGGGCGTTTAAAC
GATGCCTTGTTGCGAGAAAACTTTATTGCGCGAGTATTTGCCTATAGCGATTGGCGCAGTTCTGTGGGTGAGCAGCCTAC
GGCAAATAAAATCGTTAAGTTTCACAGCCGCTACAAGTACATGCTTATGGCTCATGGGCAAAAGCCATATCGTGAGTTGG
GGCAAATGGTTGCCCGCGCGGGCACTGCGCAAATCGATTCATTCGCGGCTACTTATATTGCAGCGTTTATGGAGGCTATT
ACTAAGCCTGCGTCGCGTAAGGGGCATTCAAATACGCTCTATCATATGCTTGGGTATTTGCGCGAAGAGGTGCCCGGTGA
GGCGCGCCAAGCGTTGGCGGCGTCGATAGAAGAGTACCGTAAGGGAATTGTTAACCTTGCTGTGCCGGTCGCTCTTTTGA
AGCATTACCTAAAAATGCACGGCAGTGACTACATTAAAGCGCAGGCTTACTTAGAACCTTATGCTAATGATTTGGGGTTG
CGCAACCAAATCTAA

Protein sequence : 
MCIGGCRVEENKIPVGISSCLLGEEVRFNGGHKQSRFCLDHLSRVFEFQGFCPEVAIGMGVPREPIRLVGSIDAPRAVGT
VDASVDVTDALAAYGDEIGRLSHSLCGYILMKNSPSCGLYSAKVYTPKGGVLPGKHAGIFARALKAVNPLLPLEEEGRLN
DALLRENFIARVFAYSDWRSSVGEQPTANKIVKFHSRYKYMLMAHGQKPYRELGQMVARAGTAQIDSFAATYIAAFMEAI
TKPASRKGHSNTLYHMLGYLREEVPGEARQALAASIEEYRKGIVNLAVPVALLKHYLKMHGSDYIKAQAYLEPYANDLGL
RNQI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 5e-56 41
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 4e-56 41
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 4e-56 41
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 2e-56 41
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 4e-56 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sde_2713 YP_528185.1 protein of unknown function DUF523 VFG0490 Protein 2e-56 41