|
Name : Sde_2504 (Sde_2504) Accession : YP_527976.1 Strain : Saccharophagus degradans 2-40 Genome accession: NC_007912 Putative virulence/resistance : Unknown Product : D-xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 3173716 - 3175047 bp Length : 1332 bp Strand : - Note : - DNA sequence : ATGAGCGTAGTACTTGGCGATAAAGAATACTTCCCCGGTGTGGGCAAAATTGAATTTGAAGGCCCAGATTCCGACAACCC ATTTGCATTTAAATATTACGATGAGAACCGTGTAGTTGCCGGCAAAACATTAAAAGAGCACTTTAAGTTCTCTGTATGTT ACTGGCACACGTTCTGCGGCACAGGTGCTGATCCATTTGGCCCTGGCCCATTGCAATTCCCGTGGAACAAGGCCGACACC GCAGACGCGCGCGCGCGTTTAAAAATGGATGCGGCATTTGAATTTATCACCAAGTTGGGCGCGCCTTATTACTGTTTCCA CGATATCGATTTAGTTGAAGAGGGCGCGAGTCGCCAAGAAACTCAACGCCGTGTACAAACGATTGTTGAATACGCAAAAG AGAAGCAAGCGGCTTCTGGCGTTAAGTTGCTTTGGGGCACCGCTAACTTATTTTCCAACCCACGTTATATGAATGGTGCA TCTACAAACCCAGATTTTAACGTTGTTGCTTATGCTGGCGCGCAGTTAAAAGATGCACTTGATGCAACCATTGCGCTAGA TGGTGAGAACTATGTTTTTTGGGGTGGCCGTGAAGGCTACATGAGCCTTTTAAATACCGATATGGGCAGAGAGCAAGAGC ATTTGGCTCGCTTTTTAACTATGGCCAGAGATTACGCTCGTGGCCAAGGTTTTACCGGTAATTTCTTTATCGAGCCTAAA CCAATGGAGCCTTCCAAGCATCAGTACGATTTTGACAGTGAAACCGTAATTGGTTTCTTGCGTCATCACGGTTTGGATAA AGACTTTAAATTAAATATAGAAACAAACCACGCCACACTTGCTAACCATACTATGGATCACGAAATGACCGTAGCGGCTA ATGCGGGCATGCTAGGTAGCATTGATGCAAACCGCGGTGATTATCAAAATGCTTGGGATACCGACCAGTTCCCTTACAAC ATTAACGAAACCGTTGAAATGATGATGGTAGTGCTGCGTGCAGGAGGGTTCCAAGGTGGTGGAGTAAACTTTGATGCTAA GCGCCGTCGTAATTCTACCGACCTAGAGGATACCTTCCACGGCCATATAGGCGGTATGGATACTTTCGCGCGCGCACTAA TTATTGCAGACAGAATTATTAGTGAAAGCAAAATCGAAAGTATGCGCAAAGAACGTTATGCTTCTTTTGATAGCGGCGCT GGTAAACAATTTGAAACGGGCGCTCTAGATTTAGCTGCCCTAGCCGAAATAGGTAACGCGATTGGTGAGCCTGCATTAAC CAGTGGTAAGCAGGAGTACTACGAGAACATTATTAACCAATATATTCGTTAA Protein sequence : MSVVLGDKEYFPGVGKIEFEGPDSDNPFAFKYYDENRVVAGKTLKEHFKFSVCYWHTFCGTGADPFGPGPLQFPWNKADT ADARARLKMDAAFEFITKLGAPYYCFHDIDLVEEGASRQETQRRVQTIVEYAKEKQAASGVKLLWGTANLFSNPRYMNGA STNPDFNVVAYAGAQLKDALDATIALDGENYVFWGGREGYMSLLNTDMGREQEHLARFLTMARDYARGQGFTGNFFIEPK PMEPSKHQYDFDSETVIGFLRHHGLDKDFKLNIETNHATLANHTMDHEMTVAANAGMLGSIDANRGDYQNAWDTDQFPYN INETVEMMMVVLRAGGFQGGGVNFDAKRRRNSTDLEDTFHGHIGGMDTFARALIIADRIISESKIESMRKERYASFDSGA GKQFETGALDLAALAEIGNAIGEPALTSGKQEYYENIINQYIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 3e-97 | 48 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 2e-97 | 48 |
