Gene Information

Name : Sde_2054 (Sde_2054)
Accession : YP_527526.1
Strain : Saccharophagus degradans 2-40
Genome accession: NC_007912
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2634389 - 2634985 bp
Length : 597 bp
Strand : -
Note : -

DNA sequence :
GTGACCAAAATACTAGTAGCTGACGATCACGACTTAGTGCGCATGGGTATAGTGCGCATGTTGAGTGACGTCGAAGGCAT
AGAGGTGGTAGGTGAAGCCTGTAATGGCGAAGATGCCGTACGCCTCGCCAGAGAATTGGCGCCAGACGTTATTCTAATGG
ACGTAAAAATGCCTGGTATGGGCGGCTTAGAAGCAACGCGAAAAATTCATCAGGCGTGTAGTGGCTGTAAAATTATTGCT
GTTACCGCTTTGTCAGACGACCTGTTTCCAGAGCGCCTTATGAAGGCGGGCGCCGCAGGTTATGTTACCAAGGGTGCCGG
TTTCGAAGAGATAGTAAACGCCATTCGCACAGTGTTGAACGGGGACCTCTATATGAGCTCTAGCATTGCGCAGCAGTTAG
CCTTGCGTAATTTTGGTTCTTCTAAAGGCTCTGCATCACCATTTGAGCAGTTATCCGAGCGCGAGCTGCAAACGGCTATA
ATGATTGCGAACAGTAAAAAGGTGCACGAAATAGCAGAGGCATTTTGTGTAAGTCCTAAACGGTCAATAGTTACCGCTAC
CGCATATTCGATAAGCTCAAAATCAACAGTGATGTAG

Protein sequence :
MTKILVADDHDLVRMGIVRMLSDVEGIEVVGEACNGEDAVRLARELAPDVILMDVKMPGMGGLEATRKIHQACSGCKIIA
VTALSDDLFPERLMKAGAAGYVTKGAGFEEIVNAIRTVLNGDLYMSSSIAQQLALRNFGSSKGSASPFEQLSERELQTAI
MIANSKKVHEIAEAFCVSPKRSIVTATAYSISSKSTVM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 5e-38 46
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 5e-38 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sde_2054 YP_527526.1 response regulator receiver VFG1889 Protein 2e-36 44