Gene Information

Name : Sde_1925 (Sde_1925)
Accession : YP_527397.1
Strain : Saccharophagus degradans 2-40
Genome accession: NC_007912
Putative virulence/resistance : Unknown
Product : type III restriction enzyme, res subunit
Function : -
COG functional category : K : Transcription
COG ID : COG1061
EC number : -
Position : 2426940 - 2428373 bp
Length : 1434 bp
Strand : -
Note : -

DNA sequence :
ATGAAATTACGACGCTGGCAGCGCGAAGCTGTGTCACGCTGCATATCCCGTTTTCGCAATGGTCAAAACCATTTTCTATG
CTTGGCGACTCCGGGTGCCGGCAAAACGTATATGGCGTCTACAGTTGCCAAAACGTTGCTTGAAAACGGAGAGGTTGATT
TTGTTTTCTGCTTTTCCCCATCGCTCAATGTCTCCCTTTCCTTTCAGTCCACTTTGGAGTCTGTACTTGGGGTTCGTTTA
AACGGACTGCTCGGCGCGAAAGGCAATGTATTAACGTACCAATCCATGCTCAATCTTGGCCAATCGTTCTGGTCATTGAT
GAAGACACACCGCACCTTGATAATCTTTGATGAAATCCATCATTGCTCCGGCGATCATCTCGGCAATGCCAACGCCTGGG
GTCAAAAGATCATTCAACACATTCAAGGTAAGGCAACCTATAGCCTCGCGTTAACCGGCACGCCCTGGCGTTCGGATCGG
ATTCCCATCGCTTTGACGTCGTATTGCCGGGAAGGAAAAGTCCATTGTGACTACAGCTATGGTTTGGCACAAGCTATCAA
AGATGGCGTTTGCCGTACGCCCAAAATCACCGTAATAGACAATGAAAAAATCACTGTACAAAACAATGGGAAAGAAGATG
TTTATGGATCCATTGGTGATCTATTGAAGTCCTCTCGGTGCACATACCAGCAACTTCTTGAAAACCTCACACTCATTCGA
TATTTGGTTGAGCAAAGCCACAAAGCCCTCAACACGTTAAGACGAGTTCAACCAAACGCAGGCGGGCTCATCGTTGCAGC
TTCAGTGGAACATGCGGTTCTTATCGCCACAATATTAGAAAGCATTTGCGGAGAATCTCCCACGGTGGTGACGTATTTGC
ATGACGAGTCTCAACAGGCGATTCAACGTTTTCGCGATGGACAGACCCGGTGGATCGTCTCAGTCGGCATGATCAGCGAA
GGCACCGATATTCCTCGTTTACAGGTCTGTTGTCACCTGACCCGCGTTAAAACGGAATTGTATTTTCGACAAGTACTAGG
CAGGATTTTGAGGGTACAAAATAGTGGCAACGAAGAAGCGCTACTCATCATGCCAGCCGAGCCTAAATTAATCGAATTTG
CACATCGGGTCGCTGAAGATATTCCTGCTGCCAATACCGTATCACTCAAGACAATGGAGGGGAGTCTGCAACCGCTGTTG
ACCGACCAAGTAGAAGCAGAGACCGAATCCGGTACCAATAAGATAGATACAATTAAATCGAACGATACTGGTGAAGATCA
AGAGTATCAGCCTGGCCTGTTATCGCTGGGGGAACTTGAAGAAGACAGTACCGCTCTGCCCTTTACCACTTTAGCGGAAG
CCTACGAGACGACTCTGGGCCTATTCGGTCGTTTTCGAAAACGCATGATTAACTTTTCGCCGGTGATTGGATGA

Protein sequence :
MKLRRWQREAVSRCISRFRNGQNHFLCLATPGAGKTYMASTVAKTLLENGEVDFVFCFSPSLNVSLSFQSTLESVLGVRL
NGLLGAKGNVLTYQSMLNLGQSFWSLMKTHRTLIIFDEIHHCSGDHLGNANAWGQKIIQHIQGKATYSLALTGTPWRSDR
IPIALTSYCREGKVHCDYSYGLAQAIKDGVCRTPKITVIDNEKITVQNNGKEDVYGSIGDLLKSSRCTYQQLLENLTLIR
YLVEQSHKALNTLRRVQPNAGGLIVAASVEHAVLIATILESICGESPTVVTYLHDESQQAIQRFRDGQTRWIVSVGMISE
GTDIPRLQVCCHLTRVKTELYFRQVLGRILRVQNSGNEEALLIMPAEPKLIEFAHRVAEDIPAANTVSLKTMEGSLQPLL
TDQVEAETESGTNKIDTIKSNDTGEDQEYQPGLLSLGELEEDSTALPFTTLAEAYETTLGLFGRFRKRMINFSPVIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13515.1 type III restriction enzyme Not tested PAGI-7 Protein 2e-90 44