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Name : Sde_1266 (Sde_1266) Accession : YP_526740.1 Strain : Saccharophagus degradans 2-40 Genome accession: NC_007912 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter- DctM subunit Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 1623613 - 1624911 bp Length : 1299 bp Strand : - Note : - DNA sequence : ATGGATATTACAGCATTAATTTTACTTTTTGTTTTTGGTGTTCTACTCGCCATAAACGTACCCATCGCCATTGCTATTGC CATTTCTACGCTGGCTACAATGTTAGTTACGATTGATTCCTTGCCCGCAGTTACAACGCTTGCACAGCGCATGAGCGCAG GTATGGATAGCTTTGCCCTATTGGCCATTCCCTTTTTTATATTCTCTGGCTTTTTAATGGGGCAAGGCGGCATTGCACGT AGGCTAATTGATTTTGCCAAAGTGTTGGTTGGTCAATTACCGGGCGGGTTAGCATTTGTAAATGTTATAGCCTGTGCGTT ATTTGGTTCTATTTCTGGGTCGGCAGTGGCTGCCACATCGGCAATTGGCGGGTTTATGATTCCAGCCATGAACAAAGAAG GTTACGACAAAAACTTTAATACCGCGGTTACGGTTACAGCCTCTACAACAGGTATGCTTATTCCCCCCAGCAATATTCTC ATTATTTATTCACTGGCGAGTGGTGGCGTTTCTATTGCTGCGTTATTTATTGCAGGGTACCTACCCGGTATTCTAGTTGC TATATCACTTATGTGTGTGTGTGGTATTTATGCAAAACGTCGTGGCTACCCTGTTGGCCAGCGTGAATCATTCGCCACAG CCATTAAGAAAACAGTGGGTGCTATTCCTAGCTTGTTTTTAGTGGTGTTGGTAATAGGCGGTATTATTGGTGGTTACTTT ACACCAACAGAGGCCGGTGCCATCGCAGTGGTGTATTCGCTTGTACTATCAATGGTGATTTACAAAGAAATCAAGCCCAA CCAAATACCAGCCATACTAACCAAATCGGTTACCACTACGGCTATTGTAATGCTACTAATCGGCGCTTCTGCCGCTATGT CTTGGTTGCTTTCTTACGAGAATATCCCTCAAGAGATAAGTGCTGGCTTATTAGGCATTACAGAAAACAAAATTATCTTG CTGCTACTTATTAACGTGTTGTTACTGGTAGTGGGTACATTTATGGATATGACTCCTGCAGTGCTTATTTTTACTCCAAT CTTTTTACCTATTGTAGAAACGCTGGGTATATCGCCACTGCATTTTGGCATTATTATGATTCTCAACTTATCTATCGGCT TGTGTACCCCCCCTGTTGGCAGCGTATTGTTTGTAGGTTGTAGTGTGGGTAAAACTTCCATTGCGCAGGTTATTAAGCCG CTAATACCTCTATATATAGCCATGTTTATAGCCCTTGCTCTGGTAACCGCATTTCCACAAATAAGCGAGTATCTACCAAA AGCGTTTGGTTTATATTAG Protein sequence : MDITALILLFVFGVLLAINVPIAIAIAISTLATMLVTIDSLPAVTTLAQRMSAGMDSFALLAIPFFIFSGFLMGQGGIAR RLIDFAKVLVGQLPGGLAFVNVIACALFGSISGSAVAATSAIGGFMIPAMNKEGYDKNFNTAVTVTASTTGMLIPPSNIL IIYSLASGGVSIAALFIAGYLPGILVAISLMCVCGIYAKRRGYPVGQRESFATAIKKTVGAIPSLFLVVLVIGGIIGGYF TPTEAGAIAVVYSLVLSMVIYKEIKPNQIPAILTKSVTTTAIVMLLIGASAAMSWLLSYENIPQEISAGLLGITENKIIL LLLINVLLLVVGTFMDMTPAVLIFTPIFLPIVETLGISPLHFGIIMILNLSIGLCTPPVGSVLFVGCSVGKTSIAQVIKP LIPLYIAMFIALALVTAFPQISEYLPKAFGLY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 3e-53 | 41 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 2e-53 | 41 |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 3e-53 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sde_1266 | YP_526740.1 | TRAP dicarboxylate transporter- DctM subunit | VFG1110 | Protein | 1e-53 | 41 |
