Gene Information

Name : Sde_1190 (Sde_1190)
Accession : YP_526664.1
Strain : Saccharophagus degradans 2-40
Genome accession: NC_007912
Putative virulence/resistance : Unknown
Product : aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0160
EC number : 2.6.1.-
Position : 1535350 - 1536624 bp
Length : 1275 bp
Strand : +
Note : -

DNA sequence :
ATGGAAAACATATTTAAAGATTTAGAATCAAACGTACAAAGTTATGCGCTGTCTTTCCCAGTGATTTTTAACCGCGCTAA
AAACGAAGAGTTATTCGACACAGAGGGTAACGCTTATATCGACTTTTTAGCAGGTGCAGGTTCTTTGAACTACGGCCATA
ACAACGATGTTATTAAAAAAGCATTAGTCGAATACATTATGGAAGATGGTGTTACCCACGGCTTAGATATGCATACCAAA
GCTAAAGCGGAATTTATGGATTCGTTTAACACCCATATTTTGCAGCCGCGTGAGCTAGATTACACCATGCAGTTCACTGG
GCCTACAGGCGCGAATGCGGTAGAGGCTGCTTTAAAACTCGCACGCAAAGTAAAAGGGCGCACAAACGTTGTTTCTTTTA
CTAACGGCTTCCACGGTGTAACAGCAGGCGCTGTTGCTGCTACAGGTAACCAGCATCATCGCGATGGAACCGGGGTGCCT
TTAGCTAACGTTTCGCGTATGCCGTTTTGCGGTTACCACGGTCAAAATGTAGACACTATTAAAATGATCGACAAATTAAT
TGGTGATCCATCTAGTGGTGTTGATGCACCTGCTGCTGCCATTGTAGAAGTTGTACAGGGCGAAGGTGGTTTAAACGTTG
CGCAAGATGAATGGTTACGCCAATTAGAAAAGTTGTGTCGCAAGCACGACATGCTGTTAATTGTGGATGATATTCAAGCT
GGCTGTGGCCGCACCGGTACTTTCTTCAGTTTTGAAAAAGCGGGTATTAAGCCAGATATCATTACTCTTTCTAAATCTTT
CAGTGGCTACGGCTTGCCAATGGCCGTTGTGTTGATGTCGCCAGAGCTCGATATTTGGAAGCCAGGCGAGCACAACGGAA
CCTTCCGCGGTAACAACCACGCATTCGTAACAGCCAAAGCCGCAATTGAGCATTACTGGAAAGATGATAAATTCCAAAAC
GAAATTGCCGAAAAATCTGCGAAAGTAACCAAGCGCTTAAAGCATATTGCAGATAAATACGGTGTAACAAAGGCGCGCTT
GAAAGGGCGTGGTTTAATGCAAGGTATTGATGTTGTTAGTGGCGAAATTGCCGATGAGATTACTACTAAAGCATTCGAAA
AAGGCTTAATTATTGAAACCGCCGGTAACTTGAGTCAGGTAATCAAAGTGTTCTGCCCATTAACTATTACTATGGAAAAA
CTTAACGCAGGCTTGGATATTGTGGAGTCGGCTTTTGCCGAAGTGCTTGGCGACAAATTGCGTAATGTATCGTAA

Protein sequence :
MENIFKDLESNVQSYALSFPVIFNRAKNEELFDTEGNAYIDFLAGAGSLNYGHNNDVIKKALVEYIMEDGVTHGLDMHTK
AKAEFMDSFNTHILQPRELDYTMQFTGPTGANAVEAALKLARKVKGRTNVVSFTNGFHGVTAGAVAATGNQHHRDGTGVP
LANVSRMPFCGYHGQNVDTIKMIDKLIGDPSSGVDAPAAAIVEVVQGEGGLNVAQDEWLRQLEKLCRKHDMLLIVDDIQA
GCGRTGTFFSFEKAGIKPDIITLSKSFSGYGLPMAVVLMSPELDIWKPGEHNGTFRGNNHAFVTAKAAIEHYWKDDKFQN
EIAEKSAKVTKRLKHIADKYGVTKARLKGRGLMQGIDVVSGEIADEITTKAFEKGLIIETAGNLSQVIKVFCPLTITMEK
LNAGLDIVESAFAEVLGDKLRNVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api75 CAF28549.1 putative diaminobutyrate transaminase Not tested YAPI Protein 5e-98 53
unnamed AAK01505.1 diaminobutyric acid aminotransferase Not tested PAGI-1 Protein 5e-83 44