Gene Information

Name : Sde_1000 (Sde_1000)
Accession : YP_526474.1
Strain : Saccharophagus degradans 2-40
Genome accession: NC_007912
Putative virulence/resistance : Virulence
Product : UDP-glucose pyrophosphorylase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1210
EC number : 2.7.7.9
Position : 1282263 - 1283087 bp
Length : 825 bp
Strand : +
Note : -

DNA sequence :
ATGATTAAGAAATGCCTGTTTCCGGTTGCGGGATATGGAACTCGATTTTTACCGGCTACAAAGTCTATGCCCAAAGAAAT
GTTGCCAGTCGTTAATAAGCCATTGGTGCAGTATGGTGTGGAAGAGGCGTTGGATGCAGGTTTGCATGAAATTGGCTTCG
TAACCGGTCGCGGTAAACGCGCCATTGCTGACCATTTTGATGTGAGCTATGAGCTAGAGCACCAAATTGCAGGGACAGAT
AAGGAAAAATATTTAGAATCTATTCGCGCAGTAATTTCAAAGGGGTCGTTTTCTTATACCCGTCAGTCTGAAATGCGCGG
TTTAGGCGATGCCATTTTAAGCGGTCGTCGTTTGATTGGTGATGAAGCCTTTGGTGTGGTTTTATCGGATGACCTATGTG
TTGCTGCCGATGAAGGTGTGTTGGCGCAAATGGTGCGTTTGTACAAGCAGTTTCGTTGCAGCATTGTGGCAGTACAAGAA
GTGCCCGAGGATCAAATTAGCAAATTTGGTGTTATTGCTGGCGACCCCATCAAAGACGGTATTTACCAAGTAACCAACAT
GGTTGAAAAACCAGAGCCTAAAGATGCGCCGAGTAACTTGGCGATTATTGGCCGTTACATCCTTACACCAGATATTTTCG
AAATTATCGAAAACACGCCTCCCGGTAAAAACAACGAAGTACAGCTAACCGATGCTTTGATGACGCAAGCGCAAAACGGC
TGCGTGTTAGCATACAAATTCAAAGGTACTCGTTTTGATTGCGGCAGTGTTGCCGGGTTTGTAGAAGCTACCAATTTTGT
TTACGAGAATATTTACAATAAATAA

Protein sequence :
MIKKCLFPVAGYGTRFLPATKSMPKEMLPVVNKPLVQYGVEEALDAGLHEIGFVTGRGKRAIADHFDVSYELEHQIAGTD
KEKYLESIRAVISKGSFSYTRQSEMRGLGDAILSGRRLIGDEAFGVVLSDDLCVAADEGVLAQMVRLYKQFRCSIVAVQE
VPEDQISKFGVIAGDPIKDGIYQVTNMVEKPEPKDAPSNLAIIGRYILTPDIFEIIENTPPGKNNEVQLTDALMTQAQNG
CVLAYKFKGTRFDCGSVAGFVEATNFVYENIYNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 2e-55 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sde_1000 YP_526474.1 UDP-glucose pyrophosphorylase VFG0964 Protein 3e-56 47