Gene Information

Name : Rfer_0854 (Rfer_0854)
Accession : YP_522133.1
Strain : Rhodoferax ferrireducens T118
Genome accession: NC_007908
Putative virulence/resistance : Resistance
Product : heavy metal translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 890186 - 892624 bp
Length : 2439 bp
Strand : +
Note : -

DNA sequence :
ATGTCAACCACCGCTTCTACCTGTCAGCACGGCCAACCTCATGCCCAAAAGTACGGCGATGCCCACAAAGGGCATGTCTA
TGAGGCGGGCACTTCAATCACCGTTCTGTCTGTGCCCGACATGTGCTGTCCGACCGAGTCCGGGATGGTCGAGAAGGACT
TACGGCGGCTGCATGGCGTGACAAGCATCACGCCAGACCTCATGCGCCGCCAGGTTCGCGTCGAGTACACCGGTCTTACC
GAAGCAGAACTCCTGACGGCCGCCCGCCATTCTGGCCTCGCGGTCGAACTTCAGGCAGAGGCAGTCCCAGTGCCCCGGAA
CTTCGAGCGCTCCGTCATCCTTGTCGAGCAGATGGATTGCCCGACGGAAGAGGCACTCATCCGCAAGCGTCTTGCCTGCG
CCGATGGCGTCGCCGCGATGACGTTCAACCTGATGCAGCGCCGGTTAACTGTTGACCATGCGCCGGGACAGCTGCCAGAT
GTTCTGAAGGCATTGCAGGAGATTGGCCTGGGAGGAACGGTGGAGCCTTCTGGGACGGCGCAAGTCCAGCCGCCCGCATC
GCAAAGGCACGCTTCAAGTTACTGGAAGCTGATTCTGGGTGGCGTAGCCGCTGTTGCGGCGGAGGCGCTTGCATTCTCGG
TTGGCGATGCGCACTGGGGCGTCATTGGGCTCACGCTGCTGACCATTGCGCTGACCGGACTGGGGACTTACAGAAAAGGT
TGGTTTGCTGTGCGACAGCTCAACCTCAATATCCACGCCCTCATGTCGGTGGCGGTCACGGGTGCTGTGTTTATTGGTCG
ATGGCCAGAGGCGGCCATGGTGATGTTCCTCTTCGCCGTGGCAGAGATGATTGAAGCAAAGTCACTCGACCGTGCGAGGC
GGGCTGTTGAGGGCTTGATGGCGATGACCTCGGATACGGCCACAGTGAAGGTCGCTGACGGCTGGGAGATAGTCCCTGCC
GCCGGCGTCGCCATAGGCACCTTGGTGCGTGCGCGCCCAGGCGAACGCATTGCGCTGGATGGCCAGGTGGTCAGCGGCTC
AACTACCGTGGACCAGGCGCCCATTACGGGCGAGAGTATTCCAGTCGACAAGTCCATCGGCGACCCGCTGTTTGCCGGGA
CCATCAACCAAGGTGGCGAAGTGGCGTACCGGACCACGGCGCCAGCGAACGACTCAACGCTGGCACGCATTGTTCGTGCG
GTGCAGGACGCGCAAGCTTCCAAGGCGCCGACGCAGCGCTTTGTCGATACCTTTGCCACGTACTACACGCCCATCGTGTT
CGGCATCGCGATGGCGGTCGCGGCGCTGCCGCCATTGGTCGCGGGTGGTGACTGGTTGACCTGGGTTTACCGGGCGCTGG
TCATGCTGGTCATTGCCTGTCCGTGCGCTCTGGTGATATCGACACCGGTCACAGTCGTTTCCGGACTCACCGCCGCAGCA
CGCCGGGGCATTCTCATCAAGGGCGGCCTTTTCCTGGAACAGGGACATCGATTGACCGTGCTGGCGCTCGACAAGACCGG
AACGCTGACCCAGGGACGGCCCTCGCTGACCGATATCGTTGCGCTGCATGGCACGCAAGACGAGCAGCTTCGCCTCGCCG
CGGCACTCGCCCGGCGCAGCGACCATCCGGTCTCGATGGCGGTCGGTGCGTATGCCGGCGACCGTTTCCCGCCGCTGGAC
GTGGCCAGTTTCAAGGCCATAAACGGGCGTGGCGTCGAAGGCGTCATTGAGGGTGTGTCGTATCTGCTGGGCAACCATCG
GTTGGTCGAGGATTTGAACGCCTGCTCACCCGCTCTTGAACTGAAGCTGAACGCGCTGGAAGAGCAAGGCAAGACTGCCA
TCGTGCTCATCGGTGATGGGCAGGCGCTCGCCATCTTTGCCGTCGCTGACGCAGTGCGCCCCCACAGTCGAGAGGCAATT
GCCGAACTGACGGCCCTCGGTATCGAACCCGTGATGCTGACGGGCGACAACCGTCACACAGCGCAGGCAATTGCACGGCA
GGTCGGAATAGCGGAGGTGCGCAGCGAATTGCTGCCGGAGCACAAGCTTGAAGCCATAAAAGAATTTCAATCCCGCGGCG
CCGTGGTGGGAATGGTCGGCGACGGCATCAATGATGCCCCGGCTCTGGCCACGGCGGATATTGGGTTTGCAATGGGAGCG
GCCGGTACCGACACCGCCATTGAGACGGCGGATGTCGCGCTCATGGACGACGACCCGCGCAAGCTGGTCGGATTTATTCG
TCTCTCAAGAGCAACGCATTCCGTTTTGTGGCAAAACATTGCGCTCGCTCTGGGTATCAAGGCGGTGTTCCTCGCATTGG
CTGTTCTCGGACAGGCGACGCTTTGGATGGCGGTCTTTGCCGATATGGGTGCCAGCCTTCTCGTCGTGTTGAACGGCCTG
CGTCTGTTGCGGCATCCGGCGAACGCGTGTAAGCAATGA

Protein sequence :
MSTTASTCQHGQPHAQKYGDAHKGHVYEAGTSITVLSVPDMCCPTESGMVEKDLRRLHGVTSITPDLMRRQVRVEYTGLT
EAELLTAARHSGLAVELQAEAVPVPRNFERSVILVEQMDCPTEEALIRKRLACADGVAAMTFNLMQRRLTVDHAPGQLPD
VLKALQEIGLGGTVEPSGTAQVQPPASQRHASSYWKLILGGVAAVAAEALAFSVGDAHWGVIGLTLLTIALTGLGTYRKG
WFAVRQLNLNIHALMSVAVTGAVFIGRWPEAAMVMFLFAVAEMIEAKSLDRARRAVEGLMAMTSDTATVKVADGWEIVPA
AGVAIGTLVRARPGERIALDGQVVSGSTTVDQAPITGESIPVDKSIGDPLFAGTINQGGEVAYRTTAPANDSTLARIVRA
VQDAQASKAPTQRFVDTFATYYTPIVFGIAMAVAALPPLVAGGDWLTWVYRALVMLVIACPCALVISTPVTVVSGLTAAA
RRGILIKGGLFLEQGHRLTVLALDKTGTLTQGRPSLTDIVALHGTQDEQLRLAAALARRSDHPVSMAVGAYAGDRFPPLD
VASFKAINGRGVEGVIEGVSYLLGNHRLVEDLNACSPALELKLNALEEQGKTAIVLIGDGQALAIFAVADAVRPHSREAI
AELTALGIEPVMLTGDNRHTAQAIARQVGIAEVRSELLPEHKLEAIKEFQSRGAVVGMVGDGINDAPALATADIGFAMGA
AGTDTAIETADVALMDDDPRKLVGFIRLSRATHSVLWQNIALALGIKAVFLALAVLGQATLWMAVFADMGASLLVVLNGL
RLLRHPANACKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 3e-180 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rfer_0854 YP_522133.1 heavy metal translocating P-type ATPase BAC0298 Protein 2e-176 58