Gene Information

Name : Rfer_0853 (Rfer_0853)
Accession : YP_522132.1
Strain : Rhodoferax ferrireducens T118
Genome accession: NC_007908
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 889671 - 890111 bp
Length : 441 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAATTGGCGAATTGTCGACCCGAAGCGGTTGCCCGGTCCAAACCATCCGCTACTACGAAGCGGAGCACTTGCTGCA
GCCGCCGCAACGCGAAGCCAACAACTACCGCTCGTACAGCCAGGCCCACCTGCACCGCCTGAACTTCATCGTCCGGTGTC
GATCGCTGGACATGGCGCAGGAGGAAATCCGAACGTTGCTGAGCCTCCAGGACGAACCCTCCCGATCCTGCGATGAAGTG
GACGCGCTTCTGGAAGCGCATCTGCAGCACGTCTCCAGCCGCATCACGGCGCTGCAGGCTTTAAAGAGGCAAATCCAGGC
CATCCGTGCGACCTGCGCGGGTGGTTCGGTCATCGGGGAATGCGGTGCCCTTGAATCGTTGAAACAGGCGACGGGCGCCA
ATGATGTGGTGCACTCGCACGTGCGCGGCGTGCACCGCTAG

Protein sequence : 
MKIGELSTRSGCPVQTIRYYEAEHLLQPPQREANNYRSYSQAHLHRLNFIVRCRSLDMAQEEIRTLLSLQDEPSRSCDEV
DALLEAHLQHVSSRITALQALKRQIQAIRATCAGGSVIGECGALESLKQATGANDVVHSHVRGVHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 3e-31 46
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-29 46
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 1e-29 46
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 1e-29 46
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 1e-29 46
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 1e-29 46
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 1e-29 46
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 1e-29 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rfer_0853 YP_522132.1 MerR family transcriptional regulator BAC0301 Protein 7e-28 49
Rfer_0853 YP_522132.1 MerR family transcriptional regulator BAC0058 Protein 3e-32 48