Gene Information

Name : fliP (Rfer_0560)
Accession : YP_521842.1
Strain : Rhodoferax ferrireducens T118
Genome accession: NC_007908
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 583326 - 584108 bp
Length : 783 bp
Strand : +
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence : 
GTGGTGAGCGATCAATTTGTTTATTCGGCGCTTGGCAAGGGACCGCTGTCCAAGGTGGCGGTGGTGTTGCTGGCGATCCT
GACGCAGTCGGCGGCACTGGCCCAGAGCGCAGGGCAGTTGCCTTTGCTGATGGGGTCGGGGCCCTCGGGAGTGAGTTTTT
CGGTGCCGATCCAGACACTGCTGTTTTTTACTGCCCTGTCCTTTTTGCCGGCCGTCTTGCTCATGATGACGGGCTTCACG
CGCATTGTGATCGTGTTGTCACTGATGCGCCAAGCCTTGGGTACACAGTCGGCGCCACCGAATCAGGTGATTGTCGGGTT
GTCGCTTTTCCTGACATTTCTGGTGATGGGGCCAACGCTGGACAAGGTCTACAGCGAGGCTTATCTGCCCTATACCAATA
GCGGGATGCCATTTGAGCAGGCGCTGGCCAAAGCGGAGGACCCGTTGCGCCAGTTTATGAGCAAACAAACGCGGCAGTCG
GATCTGGCGCTGTTTGCCAAGCTGGCCAAATTGGAACCGGGCGCAACAGCCCAGACCGTGCCGATGCGGGTGCTGGTGCC
GGCGTTCGTCACGAGCGAGCTTAAATCGGCGTTCCAGATTGGGTTCATGATCTTTATTCCTTTTCTGGTGATCGACATTG
TGGTCGCCAGTGTGCTGATGTCGCTGGGGATGATGATGTTGTCGCCGGTGTTGGTGGCCTTGCCGTTCAAACTGATGTTG
TTTGTGCTGGCCGATGGCTGGAATCTGCTGATTGGCTCTTTGGCCGCCAGTTTTGTGACCTGA

Protein sequence : 
MVSDQFVYSALGKGPLSKVAVVLLAILTQSAALAQSAGQLPLLMGSGPSGVSFSVPIQTLLFFTALSFLPAVLLMMTGFT
RIVIVLSLMRQALGTQSAPPNQVIVGLSLFLTFLVMGPTLDKVYSEAYLPYTNSGMPFEQALAKAEDPLRQFMSKQTRQS
DLALFAKLAKLEPGATAQTVPMRVLVPAFVTSELKSAFQIGFMIFIPFLVIDIVVASVLMSLGMMMLSPVLVALPFKLML
FVLADGWNLLIGSLAASFVT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 6e-25 41
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 8e-25 41
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 8e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_521842.1 flagellar biosynthesis protein FliP VFG2338 Protein 2e-59 66
fliP YP_521842.1 flagellar biosynthesis protein FliP VFG2494 Protein 9e-57 65
fliP YP_521842.1 flagellar biosynthesis protein FliP VFG1259 Protein 4e-51 63
fliP YP_521842.1 flagellar biosynthesis protein FliP VFG2016 Protein 7e-47 56
fliP YP_521842.1 flagellar biosynthesis protein FliP VFG0519 Protein 3e-25 41