Gene Information

Name : Rfer_0534 (Rfer_0534)
Accession : YP_521816.1
Strain : Rhodoferax ferrireducens T118
Genome accession: NC_007908
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 558642 - 559085 bp
Length : 444 bp
Strand : +
Note : -

DNA sequence :
ATGAAATCAATTTCTCAAAGCATGCGTCGTCGCCTCCAGGCCGGCTTCACCCTGATCGAGCTGATGGTGGTGTTGCTGAT
CATCGGGGTGCTGGCCGCCCTGATCGTGCCGAACGTGCTGGACCGCGCTGATGACGCGCGGGTCACGGCGGCCAAGACAG
ACGTCAATAACCTGATGCAGGCCCTCAAGCTCTACCGGCTGGACAACCAGCGCTACCCCACGGCCGAGCAGGGTTTGCAA
GCCTTGCTGACCAAACCCACGACCGCGCCGGTGCCTCCCAACTGGAAGTCCTACCTTGACCTGCTGCCCAATGATCCCTG
GGGCAAGCCCTATGTTTACCTCAACCCCGGCATCAAGGGCGAGGTCGATGTGATGTCCCTTGGTGCCGATGGCCAGGCCG
GGGGCGAGGGTAAAAATGCTGATATTGGCAGCTGGCAACCATAG

Protein sequence :
MKSISQSMRRRLQAGFTLIELMVVLLIIGVLAALIVPNVLDRADDARVTAAKTDVNNLMQALKLYRLDNQRYPTAEQGLQ
ALLTKPTTAPVPPNWKSYLDLLPNDPWGKPYVYLNPGIKGEVDVMSLGADGQAGGEGKNADIGSWQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 1e-21 52
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 8e-22 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rfer_0534 YP_521816.1 general secretion pathway protein G VFG1871 Protein 6e-29 57
Rfer_0534 YP_521816.1 general secretion pathway protein G VFG0180 Protein 2e-28 56
Rfer_0534 YP_521816.1 general secretion pathway protein G VFG2050 Protein 4e-22 51