Gene Information

Name : Rfer_0503 (Rfer_0503)
Accession : YP_521786.1
Strain : Rhodoferax ferrireducens T118
Genome accession: NC_007908
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 521756 - 522439 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGAGAATTTTGCTGGCAGAAGACGACTCGATGTTGGGCGATGGGCTGCGCGCGGGCTTGCGCCAGCTGGGGTTTCAGGT
GGACTGGGTGCGCGATGGCCTGGCGGCCGAGCGCGAGCTGGCCTGCGGCGACTACGCGGCCGCGGTGCTGGACCTCGGCT
TGCCCTTGAAAGACGGCATCGATGTGCTGCAAGCTGTGCGGGCAAGCAAGATCACCACCCCGGTGCTGGTGCTGACGGCC
CGCGACGCCGTGCCGGATCGGATCCGCGGCCTGGACCTGGGGGCTGATGACTATGTGGTCAAGCCGGTCGATTTGCATGA
ACTGGGTGCGCGCCTGCGCTCGCTGGTGCGCCGCGCCCATGGGCAGATGCAGGATGTCTTGCGTTGCGGTGCGGTGCTGC
TGGAACCTTCGGCCCGGCGCGTCAGTCTGAACGACGAGCCGGTGGCGCTGTCCACCCGTGAATTCGATTTGTTGCACGTG
CTGATGCTCAACGCCGACCGCGTGTTGTCGCGGGAGCAACTGGAACAGCAGCTCTACAGCTGGGGCTATGAAGTGGAAAG
CAATGCAATCGAGGTCCACATCCACCATCTGCGCCGCAAATTGCAGCCCGACTTGATCCAGACCGTACGCGGCATTGGGT
ACACCGTGCAACGCGGGTCAGCACCGGCATCGGCGTCCACATGA

Protein sequence : 
MRILLAEDDSMLGDGLRAGLRQLGFQVDWVRDGLAAERELACGDYAAAVLDLGLPLKDGIDVLQAVRASKITTPVLVLTA
RDAVPDRIRGLDLGADDYVVKPVDLHELGARLRSLVRRAHGQMQDVLRCGAVLLEPSARRVSLNDEPVALSTREFDLLHV
LMLNADRVLSREQLEQQLYSWGYEVESNAIEVHIHHLRRKLQPDLIQTVRGIGYTVQRGSAPASAST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-39 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rfer_0503 YP_521786.1 two component transcriptional regulator BAC0197 Protein 2e-39 42
Rfer_0503 YP_521786.1 two component transcriptional regulator BAC0487 Protein 1e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rfer_0503 YP_521786.1 two component transcriptional regulator VFG0473 Protein 1e-39 45
Rfer_0503 YP_521786.1 two component transcriptional regulator VFG1389 Protein 3e-29 41