Gene Information

Name : Rfer_0488 (Rfer_0488)
Accession : YP_521771.1
Strain : Rhodoferax ferrireducens T118
Genome accession: NC_007908
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0787
EC number : 5.1.1.1
Position : 504569 - 505693 bp
Length : 1125 bp
Strand : +
Note : -

DNA sequence :
ATGCCCCGCCCGATCCAAGCCACCATTCACACCGCTGCCCTGCGCCACAATCTGGCGCGCGCCCGTCTGGCCGCGCCAGA
TGCAAAAGTCTGGGCCATCGTCAAGGCCAATGCCTACGGCCATGGCATTGAGCGCGTGTTTGAAGGCCTGCGCGCGGCCG
ACGGCTTTGCCCTGCTGGACCTGGACGAAGCGCAGCGCGTGCGGGCGCTGGGCTGGCGTGGACCGATCCTTTTGTTGGAG
GGTGTGTTCGAGTTGCGCGACCTGGAGCTGTGCTCGCGCCTGGACCTGTGGCACACCGTGCACTGCGACGAGCAGATCGA
CATGCTGGCCAGCCACAAGACCAAGGTGGCGCAACGGGTGTTCCTGAAAATGAATTCCGGCATGAACCGGCTCGGCTTTA
CGCCGCAACGCTACCGCGCCGCCTGGACGCGTCTGAATGCCCTGCCGCAGGTTGATGAAATTTCCCTGATCACGCATTTC
AGCGACGCCGATGGCGCGCGCGGCATCACCGAGCAGATGGCGGTGTTTGCCGAAGTCACGCGCGACCTGCCGGGCGAGCG
CACCTTGAGCAACAGCGCGGCCACCCTGCTTCACACGCCCGCCAGGCAGCCGGGCGACGGCTTCGTCGCCTCCGACTGGG
TGCGCCCCGGCATAGCCATTTATGGCAGCGCGCCGGACTTTCCCCAGCACAGCGCCACTGACTGGGGGCTGCAGCCCAGC
ATGACACTTACTGCAAAAATAATAGCTACTCAAACAGTGGATACGGGGGCTAGCGTCGGATATGGCTCAACATTTGTGGC
CGACAAGCCGATCCAGGTCGGTGTCGTCGCCTGCGGCTATGCCGACGGCTACCCGCGCCTGTGCCCCACGGGCACGCCGG
TGCTGGTGAACGGGATTCGCACGCGCACCGTGGGCCGCGTGAGCATGGACATGCTCGCCGTCGACCTGAGTGCCGTGACG
GCAGCCGGTGGCCAGGTTGGGATCGGCAGCGAGGTCACCCTGTGGGGGCGTGCCGCCAATGGCCTGGTGCTGGGGATCGA
CGAGGTGGCGCAGCCGGCCGGGACGGTGGGCTACGAACTGATGTGCGCACTGGCGCCGCGAGTCCCCGTGCTGGTCGCAG
ACTGA

Protein sequence :
MPRPIQATIHTAALRHNLARARLAAPDAKVWAIVKANAYGHGIERVFEGLRAADGFALLDLDEAQRVRALGWRGPILLLE
GVFELRDLELCSRLDLWHTVHCDEQIDMLASHKTKVAQRVFLKMNSGMNRLGFTPQRYRAAWTRLNALPQVDEISLITHF
SDADGARGITEQMAVFAEVTRDLPGERTLSNSAATLLHTPARQPGDGFVASDWVRPGIAIYGSAPDFPQHSATDWGLQPS
MTLTAKIIATQTVDTGASVGYGSTFVADKPIQVGVVACGYADGYPRLCPTGTPVLVNGIRTRTVGRVSMDMLAVDLSAVT
AAGGQVGIGSEVTLWGRAANGLVLGIDEVAQPAGTVGYELMCALAPRVPVLVAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dadX AAC61705.1 alanine racemase Not tested PAI I CFT073 Protein 5e-77 50