Gene Information

Name : Rfer_3820 (Rfer_3820)
Accession : YP_525050.1
Strain : Rhodoferax ferrireducens T118
Genome accession: NC_007908
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4263031 - 4263696 bp
Length : 666 bp
Strand : +
Note : -

DNA sequence : 
ATGCGTTTGCTGCTGGTCGAGGACGACTTGATGATTGGGGAATCCGTGCTGGACTTGCTCCGGGCGGAAGGCTACGCGGT
CGATTGGGTCAAGGATGGGGAGATGGCCGACACCGCACTCGACTCCCAGACCTACGATTTGGTGCTGCTTGACCTGGGGC
TGCCGCGCCGGGATGGGCTTGCGGTATTGCGCCGGCTGCGCGCTCGCAAGGACCGCACACCGGTGCTCGTCGCCACGGCA
CGCGACGCCATAGCGCAACGCGTTGAAGGCCTGGACATGGGTGCCGATGACTACATCGTCAAGCCCTACGAACTCGATGA
GCTGCTGGCCCGCATACGGGCCTTGATCCGCCGCGCGGCTGGCCGCGCAGAGCCGGTCTATGAACACCTGGGTGTAAGCA
TCAACCCGGTCACGCGTGAGGTGCTGCTTGACGGACAGGCCGTGGTGCTGTCGGCACGGGAATGGTCCATCCTGGAACTG
CTGCTTGCGCGCCCGGGCATGGTGCTTTCCCGCAGGCAACTTGAAGAAAAACTCTACAGCTGGAAAGATGACCTCAGCAG
CAATGCGGTCGAGGTGTATATCCACGGACTGCGCAAGAAACTGGGGCCTCGCATCATCCAGAATGTGCGGGGTGTTGGTT
ACATGATTCCCCAAAGCGCCCCATGA

Protein sequence : 
MRLLLVEDDLMIGESVLDLLRAEGYAVDWVKDGEMADTALDSQTYDLVLLDLGLPRRDGLAVLRRLRARKDRTPVLVATA
RDAIAQRVEGLDMGADDYIVKPYELDELLARIRALIRRAAGRAEPVYEHLGVSINPVTREVLLDGQAVVLSAREWSILEL
LLARPGMVLSRRQLEEKLYSWKDDLSSNAVEVYIHGLRKKLGPRIIQNVRGVGYMIPQSAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-20 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rfer_3820 YP_525050.1 two component transcriptional regulator BAC0487 Protein 3e-25 45
Rfer_3820 YP_525050.1 two component transcriptional regulator U82965.2.orf14.gene. Protein 5e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rfer_3820 YP_525050.1 two component transcriptional regulator VFG0473 Protein 6e-25 43