Name : Rfer_3345 (Rfer_3345) Accession : YP_524585.1 Strain : Rhodoferax ferrireducens T118 Genome accession: NC_007908 Putative virulence/resistance : Virulence Product : Fis family two component sigma-54 specific transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 3713339 - 3714790 bp Length : 1452 bp Strand : + Note : - DNA sequence : ATGGCATCAAACACAACGCTGAGCAATGCCCGGATTCTGGTCGTCGATGACGAGCCCGACTTGCGCACGCTGTACGAGTT GACACTGTTGCGCGAGGGTTACAGGGTGGAAACAGCCGGCAACCTGGCTGAGGCCTTGCAGCATCTGGGCGAGCGCCGCT TTGACGTTGTGATTACCGACATGCGCCTGCCTGATGGTCTGGGCCTGGAACTGATCCAGCAACTGCGGGCGCAACAGCGC CCGGAGCGATGCGTCGTCATCACAGCCTATGGCTCGGCAGAAAATGCCGTCGAGTCACTCAAGACGGGCGCGTTTGACTA TCTGACCAAGCCGGTTGATCTCAAGCAGTTTCGATCCGTCATCGCCTCTGCCGTGCAAGACCCGGCTCCGCGGCCAACCG CGGTCGGTCGCGCCGGCTCGCCACTCCCTGAGAGCAGCGATGCCGTGTTGCAGCGGCTGGTGGGGGAATCAGACAGCATG AGGCGGGTCAAGGAGCGCATCGTCAAGGTGGCACGCAGCATGGCACCCGTGTTGGTGCATGGCGAGTCCGGCACCGGCAA GGAACTGGTGGCGCGTGCCATTCATGCCAACAGTCACCGCACCGGCAGCGCCTGGGTCGCGGTGAACTGCAGCGCGATTC CCGAGAGTCTGCTCGAAGCCGAATTTTTTGGCTCAAAGAAAGGCGCCTACACAGGATCAACCCAGGACCGCGTTGGCTTC TTCCAGGCCGCAAGCGGTGGCACCTTGTTTCTCGATGAAATTGGCGACCTGCCCCTGTCGATGCAGTCAAAGTTGCTGCG GGCCATCCAGGAGCGTTGTATCCGCCCGATCGGGTCGTCCCAGGAAGAACCGGTCGATGTCCGCATCATCAGCGCCACGC ACAAAGACCTGAGTCTGGAAGTGTTGGCGGGCCGCTTTCGGCAGGATTTGTATTACCGTCTGGATGTCATTGAAATTGAG ATTGCACCATTGCGCGAACGCCGGGAAGACTTGCCTGCGCTGTGCCAGACCTTGCTGCGCCGGATCGCGTTTGAGGCGGG CATTCCGGTGCCGACACTCTCCAAAGCGGGACTTGAACAGCTCTCCCAAGACCCGCTGCCCGGCAACGTGCGCGAGCTGG AGAATCTGTTGCAGCGCGCCGTCGCCTTGAGTGACGGCGATGAACTCCAGCTTGAACTCACCGCTCGGCAGCCGCTGACC CAGGACGCCTCTTTTCTGGATAGCGGCCCGACACCGCTGGACGATGATCAAACCACCATCCCCAGCGACTTGCAAAGCCA TCTCGACACTCAGGAACGCGACATCCTGATTCAGGCTCTGCGTGAAACCGGCTTCAATCGCACCGCCGCAGCGGCCCGGC TCGGTTTGAGCCAGCGCCAAATGGGTTATCGCATTGCCAGATTGAATATTGTTACCCCGCACAGCGGCGAATTGTCCGAT GAGTCCCTTTAA Protein sequence : MASNTTLSNARILVVDDEPDLRTLYELTLLREGYRVETAGNLAEALQHLGERRFDVVITDMRLPDGLGLELIQQLRAQQR PERCVVITAYGSAENAVESLKTGAFDYLTKPVDLKQFRSVIASAVQDPAPRPTAVGRAGSPLPESSDAVLQRLVGESDSM RRVKERIVKVARSMAPVLVHGESGTGKELVARAIHANSHRTGSAWVAVNCSAIPESLLEAEFFGSKKGAYTGSTQDRVGF FQAASGGTLFLDEIGDLPLSMQSKLLRAIQERCIRPIGSSQEEPVDVRIISATHKDLSLEVLAGRFRQDLYYRLDVIEIE IAPLRERREDLPALCQTLLRRIAFEAGIPVPTLSKAGLEQLSQDPLPGNVRELENLLQRAVALSDGDELQLELTARQPLT QDASFLDSGPTPLDDDQTTIPSDLQSHLDTQERDILIQALRETGFNRTAAAARLGLSQRQMGYRIARLNIVTPHSGELSD ESL |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 6e-73 | 41 |
BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 6e-73 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Rfer_3345 | YP_524585.1 | Fis family two component sigma-54 specific transcriptional regulator | BAC0467 | Protein | 3e-71 | 43 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Rfer_3345 | YP_524585.1 | Fis family two component sigma-54 specific transcriptional regulator | VFG1214 | Protein | 2e-97 | 49 |