Gene Information

Name : Rfer_3244 (Rfer_3244)
Accession : YP_524484.1
Strain : Rhodoferax ferrireducens T118
Genome accession: NC_007908
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3842
EC number : -
Position : 3595786 - 3596430 bp
Length : 645 bp
Strand : -
Note : -

DNA sequence : 
ATGCTTGAGCTGCGCCATATCAGTCAGAACTATGGTGATCGGGTCCTGCTGCAAGACATCAACCTGCAAGTGGCTGCCGG
TGAAATTGTGGCCCTGCTGGGGCCATCGGGCAGCGGCAAGAGCACGCTGCTCAGCATCGTGGCGGGCTTGCAACCGCCAC
TCAAGGGCAGCGTCTGGTTTGATGGCCAGGACATTACCCGGGTGCCGCCCGAGCGGCGCCACTTTGCCCTCATGTTCCAG
GACTTTGCGCTGTTTGCGCACTTGAATGTGCTCGATAACGTCGCTTTTGGGCTGGTGGAGCAGCGGCTTGCCAAATCGGA
CGCGCGCGCGAGAGCAGCGCGGATGCTGGAGCGTTTTGGTCTGCTTGATCATGCCCGGCACAAGGTGTGGACGCTCTCGG
GCGGTGAGCAGCAGCGTGTCGCGCTGGCGCGGGCCCTGATCACGAATCCGCGTGCGCTGCTGCTGGACGAGCCGTTTTCA
GCCCTGGATGCCGAGCTGCGCCAAGGCTTGCGCGAGGAATTTTGCCGGCATATTGCCGCCGCCGGTATGGCCACGCTGCT
GGTGACGCACGACGAAGCCGAGGCCCGCGCCATGGCCGCGCGCGGCGTGCGACTGGTGGACGGGCAATTGCGGGCCGCGT
GGTAG

Protein sequence : 
MLELRHISQNYGDRVLLQDINLQVAAGEIVALLGPSGSGKSTLLSIVAGLQPPLKGSVWFDGQDITRVPPERRHFALMFQ
DFALFAHLNVLDNVAFGLVEQRLAKSDARARAARMLERFGLLDHARHKVWTLSGGEQQRVALARALITNPRALLLDEPFS
ALDAELRQGLREEFCRHIAAAGMATLLVTHDEAEARAMAARGVRLVDGQLRAAW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 8e-24 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rfer_3244 YP_524484.1 ABC transporter-like protein BAC0600 Protein 3e-25 43
Rfer_3244 YP_524484.1 ABC transporter-like protein NC_008702.1.4606598. Protein 7e-22 41