Gene Information

Name : Rfer_3231 (Rfer_3231)
Accession : YP_524471.1
Strain : Rhodoferax ferrireducens T118
Genome accession: NC_007908
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3579350 - 3580126 bp
Length : 777 bp
Strand : -
Note : -

DNA sequence : 
ATGACCCCCACGCTTGCCGCTTCGCGTGCTGCGCTGCCCCCCGAGGGGGCTGCCATCGGTTTGGGGCGGCCCGGCACCGA
TGGCGATATTCCTATGGGCGATATTGTTTTGAGCGCCCGCGCCATCACCAAGCGTTTTACCGAAGGCCGGCTCGATGTGA
CGGTGCTGCAGGGCGTGGACCTGGACGTGCGGGCTGGTGAAACGCTGGCCATCGTGGGCGCCTCTGGTTCTGGCAAAAGC
ACGCTGCTGCACTTGATGGGCGGGCTCGATGCCCCCACCAGTGGTTCGGTGTTCTTGCACGGGCAGGACCTGGCGCACCA
GAGCGCTGCCGCGCAGGGTCGCTTGCGCAACCAGTACCTCGGCTTTGTTTATCAGTTTCACCACCTGCTGCCCGAATTCA
GCGCCTTGGACAACGTCGCCATGCCTTTATGGATTCGGCGTCTAGCCCCCGCAGAATCTACCCATACAGCTACTGAAATG
CTAGCAAAAGTCGGCTTGCAGGAGCGCTTGGCGCATCGACCGTCAGAGCTCTCGGGCGGCGAGCGCCAGCGTGTGGCGAT
TGCGCGAGCCCTGGTGACCCGCCCAGCCTGCGTGCTGGCCGACGAGCCCACCGGCAACCTGGACCGCAGCACCGCCAACG
GGGTGTTTGAGTTGATGCTGGAGCTGGCCCGTGTGCAAGGCACCGCCTTTGTGATGGTGACCCACGATGAATCATTGGCG
GAGCGGTGCTCGCGCCGGATCAGGCTGGTTCAGGGACGACTGCTGGAAGCGTTCTAG

Protein sequence : 
MTPTLAASRAALPPEGAAIGLGRPGTDGDIPMGDIVLSARAITKRFTEGRLDVTVLQGVDLDVRAGETLAIVGASGSGKS
TLLHLMGGLDAPTSGSVFLHGQDLAHQSAAAQGRLRNQYLGFVYQFHHLLPEFSALDNVAMPLWIRRLAPAESTHTATEM
LAKVGLQERLAHRPSELSGGERQRVAIARALVTRPACVLADEPTGNLDRSTANGVFELMLELARVQGTAFVMVTHDESLA
ERCSRRIRLVQGRLLEAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rfer_3231 YP_524471.1 lipoprotein releasing system ATP-binding protein NC_008702.1.4606598. Protein 6e-35 48
Rfer_3231 YP_524471.1 lipoprotein releasing system ATP-binding protein NC_012469.1.7686878. Protein 3e-39 45
Rfer_3231 YP_524471.1 lipoprotein releasing system ATP-binding protein CP001581.1.gene798.p Protein 5e-34 42