Gene Information

Name : Rfer_3186 (Rfer_3186)
Accession : YP_524426.1
Strain : Rhodoferax ferrireducens T118
Genome accession: NC_007908
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3524685 - 3525443 bp
Length : 759 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGAGACCCCGCTGATTGAACTCAAAGGGGTCACCAAGGTCTATGGCGAGGGCGCCACCGCATTACAAGCCCTCAA
GGGGGTTGACCTGACGATTCAAGCCGGCGATTTTGTCGCCATCATGGGCCCCAGCGGCTCGGGCAAGTCCACCGCCATGA
ATATGCTGGGTTGTCTGGACTCACCCACCACGGGCGAGTATTTGTTCAACGGTGTGCACGTCGAAACCCTGTCGCGCGAC
CAGCGCGCGCTCTTGCGCCGGCGCTTTCTGGGCTTTGTATTTCAGGGTTTCAACCTGCTGGCACGCACCTCGGCGCAAGA
AAACGTGGAACTGCCCCTGCTGTACCGGGGCGAATCCGCCAAAGCGCGCCATGCCGCCGCGACCAGAGCCCTGGCCTCCG
TGGGTCTGGCGGGCTGGGAGCACCACACACCCGCCGAGCTGTCGGGCGGCCAGCAACAGCGCGTGGCCATTGCCCGCGCC
ATCGTCACCGAACCCGCCGTGCTGCTGGCCGACGAGCCGACCGGCAACCTCGACACCCAGCGCAGCCGCGAGATCATGGA
CTTGCTGTGGGGCCTGAATGTGGAGCACGGCATCACGGTTCTGATGGTCACCCACGAAGCCGACATGGCAGCCTACGCCA
AGCGCATCGTGCATTTTGTTGACGGCGTGGTGGACAACGACACACGCAATCCACATCCGGCCGGCCTGCATGAAGCCGCC
GTCGCGCCCGTCGCACCAGCGAAACTGGAAACTGCCTGA

Protein sequence :
MSETPLIELKGVTKVYGEGATALQALKGVDLTIQAGDFVAIMGPSGSGKSTAMNMLGCLDSPTTGEYLFNGVHVETLSRD
QRALLRRRFLGFVFQGFNLLARTSAQENVELPLLYRGESAKARHAAATRALASVGLAGWEHHTPAELSGGQQQRVAIARA
IVTEPAVLLADEPTGNLDTQRSREIMDLLWGLNVEHGITVLMVTHEADMAAYAKRIVHFVDGVVDNDTRNPHPAGLHEAA
VAPVAPAKLETA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-30 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rfer_3186 YP_524426.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-50 53
Rfer_3186 YP_524426.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-43 50
Rfer_3186 YP_524426.1 ABC transporter-like protein CP001581.1.gene798.p Protein 5e-39 43