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Name : Rfer_0032 (Rfer_0032) Accession : YP_521325.1 Strain : Rhodoferax ferrireducens T118 Genome accession: NC_007908 Putative virulence/resistance : Unknown Product : N-6 DNA methylase Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : - Position : 36476 - 38110 bp Length : 1635 bp Strand : - Note : - DNA sequence : ATGAACGACGAAGAACAACAATATCTCAACAACCTTGACAAGCAACTCTGGGCCGCCGCCGACCGCCTGCGTGCCGCCGT CAACCCCAGCGAATACATGCACGTCGTCTTGGGGTTGGTGTTCCTCAAGTACATCTCCGACGCCTTCAAGGAACGCCGCC TTGAGCTGCAAGCCGCCTTCCAAGACCCCGCCAACGACTATTACCTGGGCACTGATGCGGATGAGCTAATTGCGCAAGAG CTGGAAGCGCGCGATTACTACACCGAGACCAACGTCTTCTGGGTGCCCGCCCTGGCCCGCTGGGACTTTCTCAAAGACAA CGCCAAGGTCGCCATCGACACCGTGCTCACCGTCAAAAACGGCAAAACCTTTGAATACAAGTTCAAAGGCATCGGCCGCC TGCTGGACGACGCGTTGGAGGCGGTGGAAAAGGACAACCCCAAGCTCAAAGGCGTGCTCGACAAAAGCTATGCCCGCTGG CGCGTGGACGAAGCCTTGCCCGGCCTGATTGACGAGTTTTCCAAAATCCCGTTCAACCACGGCGCGCTCAAGGCCAAGGA CATCTTGGGCCACATCTACGAATACTTTTTGGGTGAGTTCTCCATTGCCGCAGGCAAACGCGGCGGCGAGTTCTACACCC CCAAAAGCATCGTCAGCGTCATTGTGGAAATGCTGGAGCCGTTTGAAGGTCGCGTCTACGATCCGTGCTGTGGCTCGGGC GGCTTCTTTGTGCAAAGCGAGCGTTTTGTGCTGGAGCACGGAGGCAAGATCGGCCAGCTCAGCATCTACGGCCAAGAGTT CAACCCCACCACCTGGCGCCTGGCCAGCATGAACATGGCCATTCGCGGGCTGGACTTTGACTTTGGCAAAGAGCCCGCCA GCACCTACACCCGCCCCCAGCACCCCGATCTGCGCGCCGACTTCATCATGGCCAACCCGCCCTTCAACATGAAGGCCTGG AAAGAAGGCGTGAAAGACGACGATCCGCGCTGGAAGTATGGCGTGCCGCCCGACGGCAACGCCAACTTTGCGTGGATGCA GCACATGATCCACCACCTGGCCCCCCACGGCAGCATGGCCCTGCTGCTGGCCAATGGCTCCATGAGCAGTAACACCAATA ACGAGGGCGAGATTCGCAAAGCCTTAATCGAGGCTGACCTCGTGGAATGCATGGTGGCGCTGCCCGGACAGCTATTCACC AACACGCAAATCCCCGCCTGCATCTGGTTCCTTACGCGTAGCAAGGCCGAGCGCAAAGCCAAACGCAGCCGCCATGGCGA AGTGCTGTTCATCGATGCCCGCCAACTGGGCTACATGAAAGACCGCGTGCTGCGCGACTTCAAACCCGAAGACTTGGCCA AAGTCGCCGACACCTTCCACGCCTGGCAGCGCGGCGTGGGCTATGCCGACGAAGCAGGGTTTTGCAAGGCCGCCACACTG GCGGACATCGGCAAGGCGGACTACGTGCTCACACCCGGCCGTTATGTGGGTGCCGCCGCACAAGAAGCGGACGCCGAACC CTTTGAGGACAAGATGGCCCGCTTGACCGCTGCCTTAGGCGACCAGTTTAAGGAAAGCGCTCGCCTGGAGGCAGCCATTC GAAAAAACCTGGCGGGGCTGGGTTATGAAGTTTGA Protein sequence : MNDEEQQYLNNLDKQLWAAADRLRAAVNPSEYMHVVLGLVFLKYISDAFKERRLELQAAFQDPANDYYLGTDADELIAQE LEARDYYTETNVFWVPALARWDFLKDNAKVAIDTVLTVKNGKTFEYKFKGIGRLLDDALEAVEKDNPKLKGVLDKSYARW RVDEALPGLIDEFSKIPFNHGALKAKDILGHIYEYFLGEFSIAAGKRGGEFYTPKSIVSVIVEMLEPFEGRVYDPCCGSG GFFVQSERFVLEHGGKIGQLSIYGQEFNPTTWRLASMNMAIRGLDFDFGKEPASTYTRPQHPDLRADFIMANPPFNMKAW KEGVKDDDPRWKYGVPPDGNANFAWMQHMIHHLAPHGSMALLLANGSMSSNTNNEGEIRKALIEADLVECMVALPGQLFT NTQIPACIWFLTRSKAERKAKRSRHGEVLFIDARQLGYMKDRVLRDFKPEDLAKVADTFHAWQRGVGYADEAGFCKAATL ADIGKADYVLTPGRYVGAAAQEADAEPFEDKMARLTAALGDQFKESARLEAAIRKNLAGLGYEV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 2e-161 | 61 |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 1e-127 | 50 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 1e-127 | 49 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 4e-126 | 48 |
