Gene Information

Name : Rfer_2904 (Rfer_2904)
Accession : YP_524146.1
Strain : Rhodoferax ferrireducens T118
Genome accession: NC_007908
Putative virulence/resistance : Virulence
Product : prepilin peptidase
Function : -
COG functional category : N : Cell motility
COG ID : COG1989
EC number : 3.4.23.43
Position : 3214374 - 3215216 bp
Length : 843 bp
Strand : +
Note : -

DNA sequence : 
ATGCTGGTGGCAACATGGTTTGACGCCACCGTGCTGGGCGTTCTGGGCTTGTTGATTGGCAGCTTTCTCAACGTGGTGAT
TTACCGGTTACCGGTCATGCTGGAAGCGCAGTGGAAAGCCGAGTGCGCCGAAATGACCGGTAAAGAAACGACGTCGGCAG
AGAAGTTCAATCTGGCCGTACCTCGCTCGCGCTGCCTGAAGTGCGACCATCAAATCCAGTGGTATGAAAACATTCCGGTG
TTCAGCTATCTCTTTTTACGGGGAAAATGTTCAAACTGCAAGGCTCCCATCAGCTTGCGTTACCCCTTGGTGGAGCTGGC
AACGGCTGCCCTGTTTGTTTATTGCGGCTGGAAATGGGGCGCCACACCCACTGCTCTGGTCTGGTGCGGTTTCGGTGCCA
CCATGCTGGCGTTGGGCTGCATCGACTGGGACACCACGCTGTTGCCGGATGACATCACCCTGCCGCTGCTCTGGGCGGGC
TTGATTGCCGCCGCGCTGCAATGGACACCCGTCGCGCTGCCAGAGGCGCTTTGGGGCGCTGTGGCGGGCTATGTGTCACT
GTGGCTGGTTTATTGGGCCTTCAAGCTCGTGACCGGCAAGGAAGGCATGGGTTTTGGCGACTTCAAGCTGTTTGCTGCAC
TGGGTGCCTGGTTCGGCTGGCAGGCGCTGGTGCCCATCATTTTGATGGCTTCGGTGATTGGCGCGGTGATTGGCATTGCC
ATGAAATTCTCCAGCGGGTTGCGTGAAGGTGGCTACATTCCTTTCGGGCCTTTTCTGGTCGGCGCCGGCCTGACTGCGAT
GATTTTTGGCCCCGGCTCGATTCTTCGCGCGTTTGGGCTCTAG

Protein sequence : 
MLVATWFDATVLGVLGLLIGSFLNVVIYRLPVMLEAQWKAECAEMTGKETTSAEKFNLAVPRSRCLKCDHQIQWYENIPV
FSYLFLRGKCSNCKAPISLRYPLVELATAALFVYCGWKWGATPTALVWCGFGATMLALGCIDWDTTLLPDDITLPLLWAG
LIAAALQWTPVALPEALWGAVAGYVSLWLVYWAFKLVTGKEGMGFGDFKLFAALGAWFGWQALVPIILMASVIGAVIGIA
MKFSSGLREGGYIPFGPFLVGAGLTAMIFGPGSILRAFGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85237.1 putative prepilin peptidase A Not tested PAI V 536 Protein 7e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rfer_2904 YP_524146.1 prepilin peptidase VFG0114 Protein 4e-42 52
Rfer_2904 YP_524146.1 prepilin peptidase VFG0234 Protein 4e-33 48
Rfer_2904 YP_524146.1 prepilin peptidase VFG2428 Protein 5e-34 47
Rfer_2904 YP_524146.1 prepilin peptidase VFG1882 Protein 1e-37 44