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Name : Rfer_2679 (Rfer_2679) Accession : YP_523926.1 Strain : Rhodoferax ferrireducens T118 Genome accession: NC_007908 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 2947642 - 2949585 bp Length : 1944 bp Strand : + Note : - DNA sequence : ATGATTAACCGTTTTGCCGAGCCTATTTTGGCCTTGCCCCGTCCAGCCAAGCGCTTGTTGGCGCTGGGGGTGGACGCGTT GCTGTGTGCGCTAACCGTGTGGCTGGCCTTGAGCCTGCGGGTCGAGAACTGGGTCGCCATCCACGGCAACCAGTGGCTGG CGATTGGTTTGTCGCTGGCGCTGGCGTTGCCAGTGTTCATGATGTTTGGCCTGTACCGGGCGATTTTCCGCTATGCCGGG TTAACCGCCTTGCTGGCGGTCACCAAGGCGGTTTTGGTTTACGGTGTGTTGTATGCTGGGTTACTGGCTGTTCTGGCCCT GCCTGAAGTACCGCGCACGGTGGGACTGATACAACCCATCTTTTTGCTGCTGGCGGTAGGGGCTTGGCGGACGCTAGCCC GCTTCTGGCTTAGTGGCGAGTATGTGAGCCGTCTCAATCGTGGCACTTTACCCAAGGTATTGATTTATGGGGCAGGCTCG GCCGGGCGGCAACTGGTGGGTGCTATGGCGAGCAGTCTGGAGATGCACGCCGTGGGCTTTCTGGATGACGATCCGCATTT GCATGGTCGTGAGCTCAATGGCCTGCGCATTTACAACCCGGCACAGTTGCCCCAGTTGGTGACGCGCCTGCAAGTGAGCG ACGTGTTGCTGGCCATGCCATCTGCCAGCCGACAGCGGCGCAAGGATATTTTGCAATTGACGCGTCAGGCCCGTGTGGCA GTGCGCACCTTGCCAGGTTTGATGGACCTGGCCCAGGGCCATGTACTGGTCAGCGACCTGCGCGAGATTGACATTGAAGA TCTGTTGGGCCGCGATTCCGTACCACCCGATGCGTCGCTGTTTGGCAAAAACATTGCTGGCAAGGTGGTCATGGTCACGG GTGCGGGCGGATCGATTGGCAGCGAGTTGTGCCATCAGATCATCAGGCTGGCACCATCCAAACTATTGTTGGTGGAGCTG AGCGAGTGGGCCTTGTATACCGTGCACCAGAAGCTCCTGGAAATACTGCCTGAAGAGAATATGCCCCATGTGCAGGTGCT GCCGCTGCTGGCCTCGGTGCGTGATGCGGACCGGATGGCCGAGATCATGCGCACCTGGCAACCGCACACCGTGTACCACG CAGCGGCATACAAACATGTGCCCATGGTGGAGCACAACCCGGCCGAGGGCGTTAAAAACAACGTGCTGGGCACCTGGACG ACCGCCCGGGCAGCGGCCACGCACAGAGTGAGCAATTTTGTGCTTATCAGCACCGACAAGGCGGTGCGCCCGACCAACAT CATGGGTGCCAGCAAACGCCTGGCCGAAATGGTGCTGCAAGCCCTGGCCAGCCAGACCAAGCCGGGCGGCACCTGCTTCA GCATGGTCCGGTTTGGCAACGTGCTGGGGTCGTCGGGCTCAGTGGTGCCCCGGTTTCGCAAGCAAATCAAGGACGGCGGG CCGATTACCCTGACGCACGCTGACATCACCCGCTATTTCATGAGCATTCCTGAGGCGGCGCAACTGGTCATTCAGGCCGG CGCCATGGCCAAAGGAGGCGATGTATTTGTGCTGGACATGGGCGAGCCTGTGCGCATTATCGACCTGGCCCGCAGCATGG TGGAACTGTCGGGCCTGACGGTGCGTGATGTGGCCAACCCGGAGGGCGACATCGAGGTCAAGATCACCGGCTTGCGCCCG GGTGAAAAGCTCTATGAAGAGCTGTTGATTGGCGACAACCCCCTGCCCACCCAGCATCCGCGCATCATGAAGGCGCATGA GCAGTTTGTGCCGTGGCCCGAACTAAGCACCTGCCTCGATGGTTTGACTTCGGCGCTGAATGCCAATGATGTGCCGCTGA TACGCAGCTTGCTAAAACAGCTGGTGCCTGGCTACCAGCCCGATGGCGAGGTGGTGGACTGGGTGCATTTAGCGCAGACG GCGTGTCTTTTACGGGCGGCATAG Protein sequence : MINRFAEPILALPRPAKRLLALGVDALLCALTVWLALSLRVENWVAIHGNQWLAIGLSLALALPVFMMFGLYRAIFRYAG LTALLAVTKAVLVYGVLYAGLLAVLALPEVPRTVGLIQPIFLLLAVGAWRTLARFWLSGEYVSRLNRGTLPKVLIYGAGS AGRQLVGAMASSLEMHAVGFLDDDPHLHGRELNGLRIYNPAQLPQLVTRLQVSDVLLAMPSASRQRRKDILQLTRQARVA VRTLPGLMDLAQGHVLVSDLREIDIEDLLGRDSVPPDASLFGKNIAGKVVMVTGAGGSIGSELCHQIIRLAPSKLLLVEL SEWALYTVHQKLLEILPEENMPHVQVLPLLASVRDADRMAEIMRTWQPHTVYHAAAYKHVPMVEHNPAEGVKNNVLGTWT TARAAATHRVSNFVLISTDKAVRPTNIMGASKRLAEMVLQALASQTKPGGTCFSMVRFGNVLGSSGSVVPRFRKQIKDGG PITLTHADITRYFMSIPEAAQLVIQAGAMAKGGDVFVLDMGEPVRIIDLARSMVELSGLTVRDVANPEGDIEVKITGLRP GEKLYEELLIGDNPLPTQHPRIMKAHEQFVPWPELSTCLDGLTSALNANDVPLIRSLLKQLVPGYQPDGEVVDWVHLAQT ACLLRAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 3e-85 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rfer_2679 | YP_523926.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 2e-109 | 54 |
| Rfer_2679 | YP_523926.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 2e-82 | 41 |
