Gene Information

Name : Rfer_2654 (Rfer_2654)
Accession : YP_523901.1
Strain : Rhodoferax ferrireducens T118
Genome accession: NC_007908
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2919083 - 2920003 bp
Length : 921 bp
Strand : -
Note : -

DNA sequence :
ATGCAAGACACAGCTTTGACACCGCTGGGCGACGCCTCCATCGACGCCTTCATTGATGCGCTGTGGCTGGAGGAAGGCTT
GTCAAAGAACACGCTGGCGGCCTACCGGCGTGATCTGACGCTGTATGGCGCGTGGCTGCAGCCGCAGCACAAGGCGTTGC
CGGCTACGCTTGAACATGATCTGAATGGTTACTTTGCGGCGCAACACAGTGCCACCAAGGCCAGCACCGCCAATCGGCGG
CTGACGGTGTTCAAGCGTTATTTCCGCTGGGCGCTGCGCGAGCACCTGATCAGCGCCGACCCGACGCTGAAATTGCAGGC
CGCCAAGCAGGCGCTGCGCGTGCCCAAGACTTTGAGCGAGTTCCAGGTTGAAGCGCTGCTGGCAGCGCCCGATGAGCAGA
CGCCGCTGGGCGTGCGTGACCGCACCATGCTGGAGCTGATGTATGCCAGCGGGCTGCGCGTGAGTGAACTGGTGACGCTC
AAGGTCTTCAATGTCAGCTTGTCGGACAATGTGTTGCGTGTTTTTGGCAAAGGCAACAAGGAGCGGCTGGTGCCGTTTGG
CGAGGTGGCCAGTCTCTGGATCAAGCGTTATCTGGCGCAGGCCCGCCCGGAGTTGCTGGCGGGCAAGCAGACCGAAGACC
TGTTTGTGACGCACCGCGGCGCCACGCCCGGCACGGCCATGAGCCGTGTCATGTTCTGGATGATTGTGAAAAAGTATGCG
CTCAGTGCGGGCATCACGGCGCCCCTGTCACCACACACCTTGCGCCATGCTTTTGCCACGCATTTGCTCAACCATGGGGT
CGATTTGCGTGCCGTGCAGATGCTGCTCGGGCACGTGGATATCTCAACCACGACCATTTATACCCATGTGGCGCGCGAAC
GGCTCAAAGTGTTGCATGCCCAGCACCATCCGCGCGGCTAG

Protein sequence :
MQDTALTPLGDASIDAFIDALWLEEGLSKNTLAAYRRDLTLYGAWLQPQHKALPATLEHDLNGYFAAQHSATKASTANRR
LTVFKRYFRWALREHLISADPTLKLQAAKQALRVPKTLSEFQVEALLAAPDEQTPLGVRDRTMLELMYASGLRVSELVTL
KVFNVSLSDNVLRVFGKGNKERLVPFGEVASLWIKRYLAQARPELLAGKQTEDLFVTHRGATPGTAMSRVMFWMIVKKYA
LSAGITAPLSPHTLRHAFATHLLNHGVDLRAVQMLLGHVDISTTTIYTHVARERLKVLHAQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-54 52
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-54 52