Gene Information

Name : Rfer_2346 (Rfer_2346)
Accession : YP_523594.1
Strain : Rhodoferax ferrireducens T118
Genome accession: NC_007908
Putative virulence/resistance : Unknown
Product : Serine-type D-Ala-D-Ala carboxypeptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1686
EC number : 3.4.16.4
Position : 2579493 - 2580533 bp
Length : 1041 bp
Strand : +
Note : -

DNA sequence : 
GTGCGCAAACTACTATTTTTCTTTGGCCTGACGCTTTTTATTGCTGCTGTCTCACTGCCGCAAGCGCAGGCCGGTCAGAA
AAAACATCCGCTTGCCAAGTCCTCCAAGAGCACCGTCGTTGCGAAACGAAAAGTTACCAGGGTCTTTGTTGTCGGAAAAC
ACGCGTCGCTCGCCCGTGCAAAAGAGGTTTCCCTGAAGCCATCGTTTGGACAAATTGCAGGATTGCACGGTGCATCTGAC
ACCCTTGATCTGAAATCCAGCGTGGCACTGGTCATCGACCAGGAGACCAATGAAGTATTGTTCAGCAAAAATGAACAGGC
GGTCTTGCCGATTGCGTCTCTCACCAAGCTCATGACCGGACTGGTCCTGCAGGAGGCCCACCTGCCCACGGACCAGATGA
TCACCATTTCTCAAGACGACGTGGACACCGAAAAAGGCAGTACGTCACGACTTAAAGTGGGAACAACATTGAACCGAGGT
GAACTCTTGCATCTGGCGTTGATGTCAAGTGAGAACCGTGCGGCGCATGCACTGGCCCGCAGTTATCCAGGCGGCTTACC
TGTGTTTGTTGGCCTGATGAATGCCAAGGCCCAATTGATCGGCATGACCGACACCCACTATGTCGAACCGACTGGACTCT
CCAGCAAGAACCAGTCCAGTGCCCGTGATTTGGCCAAGTTGGTCAACGTTGCGCATGGCGACCCGATCTTGCGTGAATTG
ACCACCTCGCCGGATTACCAGGTGGCTGTCGGCAACCGAACACTGCAATACAACAACACAAACCGACTGGTCAAGAATCC
TTCTTGGGACATCGGCCTGCAAAAGACAGGCTACATCTCTGAGGCTGGTCGGTGTCTTGTGATGCAAACCAAAATCGCCG
GCCGCAAGTTGATCATGGTGTTTCTGGATTCAGCCGGAAAATTAACCCGTATCGCCGATGCCGAGCGGGTTCGCCGCTGG
GTAGAGTCCAAGCCTGCCATCAGGTCCAACTCGGTACCGTTAGCTAGCGCCGCTGGTGAAAAAATCGCTACCTTTCAATA
G

Protein sequence : 
MRKLLFFFGLTLFIAAVSLPQAQAGQKKHPLAKSSKSTVVAKRKVTRVFVVGKHASLARAKEVSLKPSFGQIAGLHGASD
TLDLKSSVALVIDQETNEVLFSKNEQAVLPIASLTKLMTGLVLQEAHLPTDQMITISQDDVDTEKGSTSRLKVGTTLNRG
ELLHLALMSSENRAAHALARSYPGGLPVFVGLMNAKAQLIGMTDTHYVEPTGLSSKNQSSARDLAKLVNVAHGDPILREL
TTSPDYQVAVGNRTLQYNNTNRLVKNPSWDIGLQKTGYISEAGRCLVMQTKIAGRKLIMVFLDSAGKLTRIADAERVRRW
VESKPAIRSNSVPLASAAGEKIATFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00303 YP_008207768.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR25 Protein 5e-51 48
BJAB0868_00307 YP_008211633.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR26 Protein 5e-51 48