Gene Information

Name : Rfer_0234 (Rfer_0234)
Accession : YP_521522.1
Strain : Rhodoferax ferrireducens T118
Genome accession: NC_007908
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 232916 - 233647 bp
Length : 732 bp
Strand : +
Note : -

DNA sequence : 
ATGATATCGATACGCAACATACGCAAGTCTTTCGGAAGCAATCTTGTGCTCGACGATATATCGCTGGATGTCAGTCAAGG
CGAGGTGGTCTGTGTCATCGGGGCTTCGGGATCGGGAAAGTCAACACTGTTGCGGTGTGTCAACGGCCTGGAGACCTACG
ATGCAGGCGACATCACGGTCGACGGCCAGCGCGTCGATCATGTTGGCCGCCAGATGGTCGCCATTCGCGAGAAGGTTGCG
ATGGTCTTTCAGCGGTTCAACCTGTTTCCACACCGAACCGCTTTGGAAAACGTGATGGAAGGCCCGATCTACGTCAAACG
CGAGTCGCGGGAGTCTGCCATGCGTAATGCACGCGCATTACTCGCACAAGTGGGACTGGCCGGCAAAGAAGACGCTTATC
CGGCCAGCCTTTCAGGCGGTCAGCAACAGCGCGTCGCCATCGCCCGCGCATTGGCGATGCAGCCGCGCGCCATCCTCTTT
GACGAGCCGACTTCGGCACTCGACCCAGAGCTCGTTGGTGAAGTATTGTCGGTCATGCGGGCGCTGGCCAATCAGGGTAT
GACCATGATGGTGGTGACCCATGAAATGGGCTTTGCACGCGAGGTTGCGGACCGCGTTATCTTCATCGATCGGGGCCACA
TTGTGGAGCAGGGACCAGCACGCGCTGTCCTGGCTGCGCCCCAGCACGAGCGAACACAGGATTTTCTGCGGCGCGTGACG
CACCCGATGTAG

Protein sequence : 
MISIRNIRKSFGSNLVLDDISLDVSQGEVVCVIGASGSGKSTLLRCVNGLETYDAGDITVDGQRVDHVGRQMVAIREKVA
MVFQRFNLFPHRTALENVMEGPIYVKRESRESAMRNARALLAQVGLAGKEDAYPASLSGGQQQRVAIARALAMQPRAILF
DEPTSALDPELVGEVLSVMRALANQGMTMMVVTHEMGFAREVADRVIFIDRGHIVEQGPARAVLAAPQHERTQDFLRRVT
HPM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 4e-18 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rfer_0234 YP_521522.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-19 43
Rfer_0234 YP_521522.1 ABC transporter-like protein NC_012469.1.7685735. Protein 1e-23 42