Gene Information

Name : Rfer_0205 (Rfer_0205)
Accession : YP_521494.1
Strain : Rhodoferax ferrireducens T118
Genome accession: NC_007908
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 203470 - 204900 bp
Length : 1431 bp
Strand : -
Note : catalyzes the formation of phosphoenolpyruvate from pyruvate

DNA sequence :
ATGCCCCGTCGCGCCACCAAAATTGTCGCCACTCTCGGCCCCGCCTCGAGCGACCCCGCGTTGCTGGAGCAGATGATTCG
TTCCGGCGTCAACGTGGTGCGCCTGAACTTCAGCCACGGCACGGCGCAAGACCATATTGACCGGGCAAGGCTGGTGCGTG
AAGCGGCCAAGCGCGCCGGACGCGAGATCGCCATCATGGCTGACTTGCAGGGGCCCAAAATCCGGGTTGGCAAGTTTGCC
GACGGCAAGGTGTTGCTGGAGCCGGGGCAAAAGTTCGTGCTTGACGCTGCGCGCACCGAACTCGGCGATATTGACGCCGT
CGGGCTGGACTACAAGGCATTGCCGAACGAGGTCAAGGCGGGCGATGTGCTGCTGCTCAACGATGGCCTGATCGTTATCA
CGGTCGATGCAGTCCAGGGCGCGGCGATTCACACCACCGTCAAACTGGGTGGCGAGTTGAGCAACAACAAGGGCATCAAC
AAGCAAGGTGGCGGCCTGAGCGCACCCGCGCTCACCGCCAAGGACATGGACGACATCCGCACGGCGATGAGCTTTCACGC
TGACTATGTGGCCGTCAGCTTTCCCAAAAACGCAACCGACATGGAGATGGCGCGTCAGTTGTGCAACGTGGCAGCCGAAA
ACGGCCACCGGCCCGGCCTGATTGCCAAGATCGAGCGTGCGGAGGCGATCCCCAAACTTGAAGAAATATTGCTCGCCAGC
GACGGCATCATGGTGGCGCGCGGCGACCTGGCCGTCGAGGTTGGCAATGCGGTGGTGCCGGCGCTGCAAAAACGCATGAT
CAAGCTGGCCCGCGAGCACGACAAGGTGGTGATTACCGCCACCCAGATGATGGAGTCGATGATCAACAACCCGGTACCGA
CCCGCGCCGAAGTGAGCGACGTGGCCAACGCGGTGCTGGACGGCACCGACGCTGTCATGCTGTCAGCCGAGACGGCGGCG
GGAAAATACCCGTTGGAGACGGTCGTTGAGATGGCCAAGATTTGCCATGCGGCCGAGGGCGGTGAAGATTTCAAACTCGA
AGCTGACTTCACGGGCAAGACCTTCAAACGCATTGACCAGTCAATTGCCATGGGCGCCTTGTTCACAGCGCATCACCTCG
GCGCCAAGGCGATTGTGGCCATGACCGACAGCGGCTCCACCGCGCTGTGGATGAGCCGCCACCTGATTCAGGTGCCGATT
TACGCGCTCACGTCCAAAGTGGCGACGCAGCGCAAGATGACGCTGTACCGCAATGTGCGCCCCTTGTTCATTGATACCAG
TGCCGACCGGGACACGGCGCTGAACGAGGCGGAGAACTATCTGAAAACCCGAGGCATTGTGCAGGCAGGCGACATTTATG
CCATCACCTGTGGTGAGCCCATGGGCTCGCCCGGCGGCACCAATATGCTGAAAATTTGCCGGGTTCGCTAG

Protein sequence :
MPRRATKIVATLGPASSDPALLEQMIRSGVNVVRLNFSHGTAQDHIDRARLVREAAKRAGREIAIMADLQGPKIRVGKFA
DGKVLLEPGQKFVLDAARTELGDIDAVGLDYKALPNEVKAGDVLLLNDGLIVITVDAVQGAAIHTTVKLGGELSNNKGIN
KQGGGLSAPALTAKDMDDIRTAMSFHADYVAVSFPKNATDMEMARQLCNVAAENGHRPGLIAKIERAEAIPKLEEILLAS
DGIMVARGDLAVEVGNAVVPALQKRMIKLAREHDKVVITATQMMESMINNPVPTRAEVSDVANAVLDGTDAVMLSAETAA
GKYPLETVVEMAKICHAAEGGEDFKLEADFTGKTFKRIDQSIAMGALFTAHHLGAKAIVAMTDSGSTALWMSRHLIQVPI
YALTSKVATQRKMTLYRNVRPLFIDTSADRDTALNEAENYLKTRGIVQAGDIYAITCGEPMGSPGGTNMLKICRVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 6e-116 59
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-65 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-65 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-65 41
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-65 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rfer_0205 YP_521494.1 pyruvate kinase VFG0479 Protein 4e-66 41