Gene Information

Name : hemC (Rfer_1715)
Accession : YP_522975.1
Strain : Rhodoferax ferrireducens T118
Genome accession: NC_007908
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 1851358 - 1852305 bp
Length : 948 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGAGTACTTTGACAATCGCCACACGAGAAAGCCGCCTGGCCCTGTGGCAGGCCGAATATGTCCAGGACCTGCTGACGCG
GCGCGGTCACCAGGTTGGTCTTTTGGGCATGACAACCCTGGGTGACCAGATTCTGGACCGCGCTTTGAGCAAGGTCGGTG
GCAAGGGCCTGTTTGTCAAGGAACTGGAGGTTGCGCTGGAGGATGGCCGGGCTGATCTGGCCGTGCATTCACTCAAAGAC
GTGCCGATGGAGCTGCCCGACGGCTTTGCGCTGGCCTGCGTGATGGAACGTGAAGACCCGCGCGACGCGTTTGTGTCGAA
TCAATATGCCAATCTGGCCAGCCTGCCGCAAGGCGCTGTGGTCGGCACCTCAAGCCTGCGCCGGATGGCCTTGTTGCGCG
CCCTGCGTCCGGACCTCAAGATCGAGCCCTTGCGGGGCAACCTGGACACCCGGTTGCGCAAGCTCGATGACGGTATGTAT
GCGGCCATTGTGCTGGCGGCAGCCGGTTTGAAGCGGCTCGGTCTGAGCCAGCGCATCCGCGCCACTTTTGAGCCCACCGA
TATGTTGCCCGCTGCCGGGCAGGGTGCGCTCGGCATCGAGGTGCGTAGCCAGCGTCAGGATGTGATTGATGCCTTGGCGC
CATTGGCGCACCACACCACTTGGCTGGCGGTTTCGGCTGAGCGCGCAGTGAGCCGGGCCATGGGCGGGAGTTGTTCCATG
CCGCTGGCCGCGTATGCCACCCTGGCCGCCGATATTTTGACGATCGATGCCGCCTGGGGCGACCCGGATGGCAAGCTGGC
CTTGGTGCATGTGCGCGCCAGTGCGGCGGTGTCCGATCTCGCCAGTGCCACAGCATTGGGCGCTCGGGTGGCGGCAGATT
TGCGCGCGGCCGTGCTGGCCAATGGCGGCACACTGCTGGTGGCGGACGCGCCGCAGGGCCAGGCCTGA

Protein sequence :
MSTLTIATRESRLALWQAEYVQDLLTRRGHQVGLLGMTTLGDQILDRALSKVGGKGLFVKELEVALEDGRADLAVHSLKD
VPMELPDGFALACVMEREDPRDAFVSNQYANLASLPQGAVVGTSSLRRMALLRALRPDLKIEPLRGNLDTRLRKLDDGMY
AAIVLAAAGLKRLGLSQRIRATFEPTDMLPAAGQGALGIEVRSQRQDVIDALAPLAHHTTWLAVSAERAVSRAMGGSCSM
PLAAYATLAADILTIDAAWGDPDGKLALVHVRASAAVSDLASATALGARVAADLRAAVLANGGTLLVADAPQGQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-61 58
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-61 58