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Name : Rfer_1708 (Rfer_1708) Accession : YP_522968.1 Strain : Rhodoferax ferrireducens T118 Genome accession: NC_007908 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 1837996 - 1839870 bp Length : 1875 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAATGCACCCGACAAATTCAGCCAGTTGATGAGCCTCACGCGCGAGCCCCTGCCGGCCTCGCGCAAGATCTACGTGCC CGGCACGCAAGCCGATATTCAAGTGCCGATGCGTGAAATCATGCAGAGCAACGGCGAGGCCGTCGTGGTGTATGACACCT CCGGCCCCTACACCGATCCGAATGCCAACATCGACGTGCGCCAGGGCCTGCCCTCGGTGCGCAGTCCCTGGATCGAATCG CGTGGTGACACCGAGTCCTACACCGGCCGCACGCCCTTTGCACTGGACGATGGACTGAAGAATGGCGACTCTGAATCATT GGCATCCTTGCGCGTGCAGGCTGCGGGCCTGCAGCGCACGCCGCGCCGCGCCAAAGCCGGTGCCAACGTGTCGCAGATGC ATTACGCTAGATCCGGCATCATCACCCCCGAGATGGAATACGTCGCCATCCGCGAGAACCAGAAGCTGGCGTGGATGGAG CAGTACCTGGGCAATGCCGAGCGCGAAGCACGGCTGGCGGGCAACAGCTTCGGCGCCAACATCCCGAAGATCATGACGCC CGAGTTCGTGCGCGATGAAGTGGCCCGTGGCCGCGCCATCATCCCGGCCAACATCAACCACCCCGAAGTCGAGCCGATGG TGATTGGCCGCAACTTCCTGGTCAAGATCAACGCCAACATCGGCAACTCGGCCGTGACATCGAGCATCGAGGAAGAAGTC GAAAAACTGGTGTGGTCGATGCGCTGGGGCGCCGACACCGTGATGGACCTGTCCACCGGCCGCAACATCCACACCACGCG CGACTGGATTCTGCGCAACTCGCCGGTGCCGATCGGCACCGTGCCGATTTACCAGGCGCTGGAAAAAGTCGGCGGCGTGG CCGAAGACCTGACCTGGGCAATCTTCCGCGACACGTTGATCGAGCAAGCCGAGCAGGGCGTCGATTACTTCACCGTGCAC GCCGGCGTGCGCCTGGCCTTCATCCACCTCACGGCGAATCGCATGACCGGCATCGTGTCGCGCGGCGGCTCGATCATGGC CAAGTGGTGTATTGCCCACCACAAAGAGAATTTCATCTACAGCCACTTTGATGAAATGACCGAAATCCTGAAGGCCTACG ACGTGAGCTACTCATTAGGCGATGGCCTGCGCCCCGGTTCCGGTGCCGATGCCAATGACGAAGCGCAGTTCGCCGAATTG CGCACCCTGGGTGAACTCACGCAGCAAGCCTGGCAGCAGGACGTGCAGGTGATGATCGAAGGCCCCGGCCATGTGCCGAT GCACATGGTGCAGGCCAACATGACCGAGCAGCTAAAAGCTTGCCACGAAGCGCCGTTCTACACCCTGGGGCCCCTGACCA CCGACATCGCGCCCGGCTACGACCACATCACCAGCGGCATTGGCGCGGCCATGATCGGCTGGTTCGGCACCGCCATGCTG TGTTACGTCACGCCCAAGGAACACCTGGGTTTGCCGGATCGCGACGACGTCAAAGTGGGCATCATCACCTACAAGATTGC AGCCCATGTGGCCGACGTGGCCAAGGGTCATCCCGGCGTGCGGGCGCGTGATGACGCGCTGTCCAAAGCACGCTTCGAGT TCCGCTGGATGGACCAGTTCAACCTGTCGCTTGACCCCGACACGGCGCGCAACTTTCACGACGAAACTTTGCCCAAGGAC TCGTCGAAAGTGGCGCATTTCTGCTCCATGTGCGGACCCAAGTTCTGCTCCATGAAAATCTCGCAGGAGGTGCGCGACTA CGCCAAGACCCGCGGCGTGAGCGAGGAGCAGGCGCTGCAGTCTGGCATGCAAACCAAGTCCGAGGAGTTCAGACTAGCCG GTGGAGAGATGTACATCCCGATCAGTCCGGCTTGA Protein sequence : MNAPDKFSQLMSLTREPLPASRKIYVPGTQADIQVPMREIMQSNGEAVVVYDTSGPYTDPNANIDVRQGLPSVRSPWIES RGDTESYTGRTPFALDDGLKNGDSESLASLRVQAAGLQRTPRRAKAGANVSQMHYARSGIITPEMEYVAIRENQKLAWME QYLGNAEREARLAGNSFGANIPKIMTPEFVRDEVARGRAIIPANINHPEVEPMVIGRNFLVKINANIGNSAVTSSIEEEV EKLVWSMRWGADTVMDLSTGRNIHTTRDWILRNSPVPIGTVPIYQALEKVGGVAEDLTWAIFRDTLIEQAEQGVDYFTVH AGVRLAFIHLTANRMTGIVSRGGSIMAKWCIAHHKENFIYSHFDEMTEILKAYDVSYSLGDGLRPGSGADANDEAQFAEL RTLGELTQQAWQQDVQVMIEGPGHVPMHMVQANMTEQLKACHEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAML CYVTPKEHLGLPDRDDVKVGIITYKIAAHVADVAKGHPGVRARDDALSKARFEFRWMDQFNLSLDPDTARNFHDETLPKD SSKVAHFCSMCGPKFCSMKISQEVRDYAKTRGVSEEQALQSGMQTKSEEFRLAGGEMYIPISPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 68 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 68 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 67 |
