Gene Information

Name : Rfer_1534 (Rfer_1534)
Accession : YP_522797.1
Strain : Rhodoferax ferrireducens T118
Genome accession: NC_007908
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1651212 - 1651865 bp
Length : 654 bp
Strand : -
Note : -

DNA sequence :
ATGAGTCTGGTGGTCTCCAATTTAAGCAAGCACTACGGCGCGGTGCCGGTATTTGCCAATGTGTCCTTGAGCGTGCCCGA
CGGCGAGTTTGTGGCGATCGTGGGGGAGTCCGGCGTTGGCAAGTCCACCCTGCTCAACTGTCTGGCCGGGCTGGACCAGT
GGGACAGCGGCTCGGTCGTTCTCGATGGCCTTGATCTGGGGCAGTTGAACGACGACCAGCTGGCGCGCCTGCGGCGTGAA
AAAATCGGTTTTGTATTCCAGGCCTTTCACGTGCTGCCGCACCTGGATGTGGCGCAAAACGTGGCGCTGCCCTTGATGCT
GCTGGGCCAGCACGATGATGCCCGGGTGCAGGCCATGCTGGCAGCGGTGGGCCTGGGCGGCCTGGGCGCGCGCCTGCCGC
AGCAGCTCAGTGGCGGCCAGTTGCAGCGCGTGGCCATTGCCCGCGCCCTGGTGCACCGGCCAAAACTGCTGCTGGCCGAC
GAGCCCACCGGCAACCTGGACCCCAGCACGGCCGCAAAAGTGATGGACGCCCTGATTGAGCAGGCCCGCCAACAACACGC
CTCGCTGGTGCTGGTCACCCATTCACAAGCCGCCGCCACCCGCGCCGACCGGGTGCTGCGGCTCGCTGCGGATGGTCTGT
TCACGCCCGGCTGA

Protein sequence :
MSLVVSNLSKHYGAVPVFANVSLSVPDGEFVAIVGESGVGKSTLLNCLAGLDQWDSGSVVLDGLDLGQLNDDQLARLRRE
KIGFVFQAFHVLPHLDVAQNVALPLMLLGQHDDARVQAMLAAVGLGGLGARLPQQLSGGQLQRVAIARALVHRPKLLLAD
EPTGNLDPSTAAKVMDALIEQARQQHASLVLVTHSQAAATRADRVLRLAADGLFTPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-28 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-28 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-28 46
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 46
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-20 42
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 9e-13 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rfer_1534 YP_522797.1 ABC transporter-like protein NC_008702.1.4606598. Protein 7e-25 48
Rfer_1534 YP_522797.1 ABC transporter-like protein CP001581.1.gene798.p Protein 3e-31 47
Rfer_1534 YP_522797.1 ABC transporter-like protein NC_012469.1.7686878. Protein 6e-25 45
Rfer_1534 YP_522797.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-28 42