Gene Information

Name : Rfer_1263 (Rfer_1263)
Accession : YP_522528.1
Strain : Rhodoferax ferrireducens T118
Genome accession: NC_007908
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 1357372 - 1357932 bp
Length : 561 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAGACTATTTGATCTGATCGCGGGCGCTTGCGCTGGGCTGGTCTTGTTGCTGCCGATTGTGCTGGTCGCCTTGGC
GGTGCGCCTGACTTCAAAAGGGCCAGCCCTGTATTGGTCTGACCGGGTGGGGCGCAACAACAAGATTTTCAAAATGCCCA
AGTTCCGCAGCATGCAGATCGGCACCCCTGCGGTGGCGACTCATTTGCTGAGCAACCCGGATGCTTACCTGACACCCATC
GGCAGCTTCTTGCGCAAAAGCAGCCTGGACGAACTGCCACAGTTGTGGAGCATTCTGGCAGGTGACATGAGTTTTGTCGG
GCCACGCCCGGCCCTGTTTAATCAACACGACTTGATTGAATTGCGCACCCAGCAAGGTGTGCATCCGCTGGTGCCTGGCC
TGACTGGCTGGGCGCAGGTGAATGGGCGCGATGAGTTGCCCATTCTGGACAAGGTGAAGCTCGATGTGGAATATTTGCAC
CACCGGTCGCTCTGGTTTGACATTCGCATTTTGTGGCTGACGCTGGTGAAGGTGTTGCGGCGGGATGGGGTGTCGCATTG
A

Protein sequence : 
MKRLFDLIAGACAGLVLLLPIVLVALAVRLTSKGPALYWSDRVGRNNKIFKMPKFRSMQIGTPAVATHLLSNPDAYLTPI
GSFLRKSSLDELPQLWSILAGDMSFVGPRPALFNQHDLIELRTQQGVHPLVPGLTGWAQVNGRDELPILDKVKLDVEYLH
HRSLWFDIRILWLTLVKVLRRDGVSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 1e-32 49
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-32 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rfer_1263 YP_522528.1 sugar transferase VFG1369 Protein 1e-27 50
Rfer_1263 YP_522528.1 sugar transferase VFG1309 Protein 4e-33 46