|
Name : Rfer_1170 (Rfer_1170) Accession : YP_522437.1 Strain : Rhodoferax ferrireducens T118 Genome accession: NC_007908 Putative virulence/resistance : Unknown Product : transposase IS66 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 1253824 - 1255347 bp Length : 1524 bp Strand : - Note : - DNA sequence : ATGGTGATCGCACCCGAACAACTCACCCACATGAGTGCAGACGAACTGCGCGACGTGGTGCAGTCCCTGTTCAAGACACT GACCTTCAAACAAGCCACCATCGACAAGCTCACGCATGAGAATGCTTATCTCAAACGCCTGAAGTTTGCCGCCCAGAGTG AGCGCTTTAGCGCCGAGCAAAGAAGCCTGCTGGAAGAAACCCTTGATGAGGATCTGCAGGCGGTGAGCGACGAGATCGAG CAACTCAAGCCCACGGATGCGCCTGCACCCCGGATGAAGGAACAACCCAAACGCCAGCCATTGCCAGCGAATCTTGCCCG CGTGGAGATCCACCACGAACCCGATTCCACCACCTGCGCTTGCGGCTGCCAAATGAAGCGCATCGGCGAAGATGTCGCCG AGAAGCTGGACTACCAGCCCGGCGTCTTCAGTGTCGAGCGCCATGTGCGCGGCAAATGGGCTTGCGCCAAGTGCCAAACC CTGATCCAGACTCCGGTGGCGGCGCATGTCATTGATAAGGGCATCCCCACCACTGGTCTGCTGGCCCAGGTGCTGGTGGC CAAGTTCGCTGACCATCTGCCGCTTTATCGCCAGGAGGCCATCTTTGGTCGTGCCGGTTTGGCCATTGCTCGCTCCACAC TGGGTGCCTGGGTCGGCAGCTGTGGTGTGCAGCTGCAACCCCTGGTCGATGCACTCAAAGCTGAGATCCTCCAGCACAAC GTAGTGCATGCCGATGAGACACCCGTGCAGATGCTCAAGCCCGGCACCGGTAAAACACACCGCTCTTACCTGTGGGCCTA TGCCGCCGGTGCCTTCGAGGACACCCGGGCGGTGGTCTATGACTTCTGCGAATCACGTGCCGGGGAGAATGCCAAGACCT TTCTGGGTGACTGGCGCGGTAGCCTAGTCTGTGACGACTTCAGTGGTTACAAGCAACTGATGGCCCAGGGTGTGACCGAA GTCGGTTGTCTGGCCCATGCCCGGCGCAAGTTCTTTGACCTGCATGCCAGCAACAAGAGCCAGATTGCGCACAGTGCGCT GGAGCAAATCGCCAGGGTTTACGACATTGAGCGCGAAGTCAAAGAACTGCTTCCCGATGAGCGACGACGAATACGCCAGG AGAAATCAAAACCACTGCTGGATGCCTTGCACCAGTGGATGATCCTGAACCGCCAGAAGATCACGGATGGTTCAGCCACG GCCAAAGCGTTGGATTACAGCCTGCGGCGCTGGTCTGCGCTGACGCGCTTCCTCTCCGACGGTCAACTGCCGGTGGACAA CAACCACATCGAAAACCAGATCCGTCCGATTGCCATCGGGAGGAACAACTGGCTGTTTGCGGGTTCACTGCGTGCGGGCA AGCGCGGTGCAGCTGTGATGAGTCTGATCCAGAGTGCCAGGCTCAATGGGCATGATCCGTTTGCCTACCTCAAGGATGTT CTAACCCGGTTGCCTACGCAGCGGGCAAGTCAGATTCATGAACTGTTGCCGCATCGCTGGCAGCCGCAAATTCAATTCAC TTGA Protein sequence : MVIAPEQLTHMSADELRDVVQSLFKTLTFKQATIDKLTHENAYLKRLKFAAQSERFSAEQRSLLEETLDEDLQAVSDEIE QLKPTDAPAPRMKEQPKRQPLPANLARVEIHHEPDSTTCACGCQMKRIGEDVAEKLDYQPGVFSVERHVRGKWACAKCQT LIQTPVAAHVIDKGIPTTGLLAQVLVAKFADHLPLYRQEAIFGRAGLAIARSTLGAWVGSCGVQLQPLVDALKAEILQHN VVHADETPVQMLKPGTGKTHRSYLWAYAAGAFEDTRAVVYDFCESRAGENAKTFLGDWRGSLVCDDFSGYKQLMAQGVTE VGCLAHARRKFFDLHASNKSQIAHSALEQIARVYDIEREVKELLPDERRRIRQEKSKPLLDALHQWMILNRQKITDGSAT AKALDYSLRRWSALTRFLSDGQLPVDNNHIENQIRPIAIGRNNWLFAGSLRAGKRGAAVMSLIQSARLNGHDPFAYLKDV LTRLPTQRASQIHELLPHRWQPQIQFT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EXB16 | ABD94703.1 | ISPpu14 transposase Orf3 | Not tested | ExoU island B | Protein | 2e-131 | 68 |
| RL059 | AAP84184.1 | transposase | Not tested | PAPI-1 | Protein | 1e-159 | 63 |
| tnpC | AEZ06051.1 | transposase | Not tested | Tn6167 | Protein | 1e-132 | 52 |
| BCAM0248 | YP_002232880.1 | putative transposase | Not tested | BcenGI11 | Protein | 2e-82 | 41 |
