Gene Information

Name : DSY4623 (DSY4623)
Accession : YP_520856.1
Strain : Desulfitobacterium hafniense Y51
Genome accession: NC_007907
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5251378 - 5252061 bp
Length : 684 bp
Strand : -
Note : similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 3E-62)

DNA sequence : 
ATGAAAATTTTAGTAGTCGATGATGATGAGCGGATCCGAGAGATTGTCCGCCTCTATCTGGAAGCGGAAGGCTATGACAT
TGAAGAAGCGGACAATGGGAATAGTGCTTTGGAGAAGGTTCGCAAGGACTCCTTCGATCTCGTTATTCTCGATTTAATGA
TGCCGGGTCTCGATGGGTGGACGGTCTGCAAAGTCTTACGGAAAGAGACGAAAATTCCGATAATCATGTTGACAGCAAAA
GGGGAAGAAAATGATCGGGTTCTAGGATTTGATTTAGGAGCGGATGATTATGTCGTGAAACCCTTTAGCCCAAGGGAACT
CAGTGCTCGGGTCAAGGCTGTTCTCCGACGACTTGAAGGAGAACCGACAAAAGAGCATCTTATAACTTACCCCGGGTTTA
CGATCAATCAAATTACACGCGAAGTCGTTGTGGATGAAACAGTGGTTAAGCTCACAGCGAAAGAGTTTGATCTCCTCTTA
GTATTAGCCAAGAATCCAAGTCGAATCTTTACGCGCGACCAGTTGTTGAACACGGTCTGGGAGTATGATTACTGCGGGGA
TTCAAGGACCGTCGATACACATATCAATCGCTTGCGTTCAAAACTTGAGAGTCAAGTCGGGTTGAGCGACTTTATTCAAA
CAGTTAGAGGAGTGGGGTACAAATTCGAATGGAGTGGTCACTAA

Protein sequence : 
MKILVVDDDERIREIVRLYLEAEGYDIEEADNGNSALEKVRKDSFDLVILDLMMPGLDGWTVCKVLRKETKIPIIMLTAK
GEENDRVLGFDLGADDYVVKPFSPRELSARVKAVLRRLEGEPTKEHLITYPGFTINQITREVVVDETVVKLTAKEFDLLL
VLAKNPSRIFTRDQLLNTVWEYDYCGDSRTVDTHINRLRSKLESQVGLSDFIQTVRGVGYKFEWSGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-42 45
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 9e-42 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DSY4623 YP_520856.1 hypothetical protein NC_002952.2859905.p0 Protein 9e-48 49
DSY4623 YP_520856.1 hypothetical protein NC_007793.3914279.p0 Protein 1e-47 49
DSY4623 YP_520856.1 hypothetical protein NC_003923.1003749.p0 Protein 1e-47 49
DSY4623 YP_520856.1 hypothetical protein NC_002745.1124361.p0 Protein 1e-47 49
DSY4623 YP_520856.1 hypothetical protein NC_009782.5559369.p0 Protein 1e-47 49
DSY4623 YP_520856.1 hypothetical protein NC_002951.3237708.p0 Protein 1e-47 49
DSY4623 YP_520856.1 hypothetical protein NC_007622.3794472.p0 Protein 9e-48 49
DSY4623 YP_520856.1 hypothetical protein NC_002758.1121668.p0 Protein 1e-47 49
DSY4623 YP_520856.1 hypothetical protein NC_009641.5332272.p0 Protein 1e-47 49
DSY4623 YP_520856.1 hypothetical protein NC_013450.8614421.p0 Protein 1e-47 49
DSY4623 YP_520856.1 hypothetical protein NC_012469.1.7685629. Protein 6e-45 47
DSY4623 YP_520856.1 hypothetical protein AE000516.2.gene3505. Protein 2e-43 46
DSY4623 YP_520856.1 hypothetical protein NC_012469.1.7686381. Protein 8e-46 45
DSY4623 YP_520856.1 hypothetical protein HE999704.1.gene2815. Protein 3e-47 45
DSY4623 YP_520856.1 hypothetical protein CP000034.1.gene3671. Protein 9e-45 43
DSY4623 YP_520856.1 hypothetical protein AE015929.1.gene1106. Protein 8e-34 42
DSY4623 YP_520856.1 hypothetical protein NC_002758.1121390.p0 Protein 5e-38 41
DSY4623 YP_520856.1 hypothetical protein NC_010079.5776364.p0 Protein 5e-38 41
DSY4623 YP_520856.1 hypothetical protein NC_002952.2859858.p0 Protein 5e-38 41
DSY4623 YP_520856.1 hypothetical protein NC_007622.3794948.p0 Protein 5e-38 41
DSY4623 YP_520856.1 hypothetical protein NC_003923.1003417.p0 Protein 5e-38 41
DSY4623 YP_520856.1 hypothetical protein NC_013450.8614146.p0 Protein 5e-38 41
DSY4623 YP_520856.1 hypothetical protein NC_002951.3238224.p0 Protein 5e-38 41
DSY4623 YP_520856.1 hypothetical protein NC_007793.3914065.p0 Protein 5e-38 41
DSY4623 YP_520856.1 hypothetical protein AF155139.2.orf0.gene Protein 3e-40 41
DSY4623 YP_520856.1 hypothetical protein NC_014475.1.orf0.gen Protein 8e-38 41
DSY4623 YP_520856.1 hypothetical protein NC_005054.2598277.p0 Protein 8e-38 41
DSY4623 YP_520856.1 hypothetical protein AE016830.1.gene1681. Protein 7e-45 41
DSY4623 YP_520856.1 hypothetical protein BAC0039 Protein 3e-38 41
DSY4623 YP_520856.1 hypothetical protein BAC0596 Protein 8e-38 41
DSY4623 YP_520856.1 hypothetical protein CP000034.1.gene2186. Protein 3e-38 41
DSY4623 YP_520856.1 hypothetical protein NC_002695.1.916589.p Protein 2e-38 41
DSY4623 YP_520856.1 hypothetical protein CP001138.1.gene2239. Protein 8e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DSY4623 YP_520856.1 hypothetical protein VFG1563 Protein 2e-42 45
DSY4623 YP_520856.1 hypothetical protein VFG1702 Protein 3e-42 44
DSY4623 YP_520856.1 hypothetical protein VFG1390 Protein 3e-39 43
DSY4623 YP_520856.1 hypothetical protein VFG1389 Protein 4e-32 41