Gene Information

Name : DSY4121 (DSY4121)
Accession : YP_520354.1
Strain : Desulfitobacterium hafniense Y51
Genome accession: NC_007907
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4703838 - 4704554 bp
Length : 717 bp
Strand : -
Note : similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 1E-56)

DNA sequence : 
TTGGAGGATACTATGGTGAAGATTTTGCTCGTTGAAGACGATGTAATCATTCAAGAGCTTGTAAACTACAATCTACAACG
TGAAGGCTATACTGTAATCATCGCCGAAGAAGGGAATAGTGCCTTACAGTTATTAGATAAGGAGAAGCCGGATCTTGTAC
TTTTGGATGTGATGCTTCCGGAATTGGATGGGCTGGAAGTGTGCAAAAAAATCCGAGGGAACCAAGAGACAGCAAGCCTC
CCCATCATTATGCTCAGTGCCCGGGATGAGGTGGCTGATCGGGTCATTGGCCTGGAGCTTGGTGCAGATGATTATGTCAC
CAAACCTTTCAGTCCCCGGGAGTTATTAGCACGGATTAAGGCCCGCTTGAGAGAAGAAAAACGCAATTCAACCCCCCTGC
CGACTTCTCTTACTTGGGGTGACTTAGAGATCTGGCCTGAGAGCTATATGGTCACAGTAAAAGGCGAGTATGTCACCCTT
ACGGGCAAGGAATTTGATCTGCTGCATATTTTTATGAAACGCCCCAACCAGGTCTTCAGCAGAGAGTACCTCTTGCAGAA
AGTCTGGGGATATACAATAAGCGGGGATACAAGAACTGTAGATGTTCATATAAGTAACTTAAGGAGTAAGCTCAAATCCA
TTTCCCCTATTATTGAATCTGTACGAGGGGTTGGTTACCGTTTGGCTGTAAACCACTCTAAGCCCAAAGACTTCTAA

Protein sequence : 
MEDTMVKILLVEDDVIIQELVNYNLQREGYTVIIAEEGNSALQLLDKEKPDLVLLDVMLPELDGLEVCKKIRGNQETASL
PIIMLSARDEVADRVIGLELGADDYVTKPFSPRELLARIKARLREEKRNSTPLPTSLTWGDLEIWPESYMVTVKGEYVTL
TGKEFDLLHIFMKRPNQVFSREYLLQKVWGYTISGDTRTVDVHISNLRSKLKSISPIIESVRGVGYRLAVNHSKPKDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-37 46
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-37 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DSY4121 YP_520354.1 hypothetical protein NC_012469.1.7685629. Protein 3e-45 49
DSY4121 YP_520354.1 hypothetical protein HE999704.1.gene2815. Protein 1e-49 48
DSY4121 YP_520354.1 hypothetical protein NC_002952.2859905.p0 Protein 6e-49 46
DSY4121 YP_520354.1 hypothetical protein NC_007793.3914279.p0 Protein 6e-49 46
DSY4121 YP_520354.1 hypothetical protein NC_003923.1003749.p0 Protein 7e-49 46
DSY4121 YP_520354.1 hypothetical protein NC_007622.3794472.p0 Protein 5e-49 46
DSY4121 YP_520354.1 hypothetical protein NC_002745.1124361.p0 Protein 6e-49 46
DSY4121 YP_520354.1 hypothetical protein NC_009782.5559369.p0 Protein 6e-49 46
DSY4121 YP_520354.1 hypothetical protein NC_002951.3237708.p0 Protein 6e-49 46
DSY4121 YP_520354.1 hypothetical protein NC_002758.1121668.p0 Protein 6e-49 46
DSY4121 YP_520354.1 hypothetical protein NC_009641.5332272.p0 Protein 6e-49 46
DSY4121 YP_520354.1 hypothetical protein NC_013450.8614421.p0 Protein 6e-49 46
DSY4121 YP_520354.1 hypothetical protein AE016830.1.gene1681. Protein 2e-45 45
DSY4121 YP_520354.1 hypothetical protein CP004022.1.gene3215. Protein 8e-32 44
DSY4121 YP_520354.1 hypothetical protein NC_002695.1.915041.p Protein 1e-27 44
DSY4121 YP_520354.1 hypothetical protein CP000034.1.gene3834. Protein 1e-27 44
DSY4121 YP_520354.1 hypothetical protein NC_012469.1.7686381. Protein 8e-45 44
DSY4121 YP_520354.1 hypothetical protein CP001138.1.gene4273. Protein 1e-27 43
DSY4121 YP_520354.1 hypothetical protein BAC0533 Protein 1e-27 43
DSY4121 YP_520354.1 hypothetical protein CP000647.1.gene4257. Protein 1e-27 43
DSY4121 YP_520354.1 hypothetical protein CP001918.1.gene5135. Protein 2e-24 43
DSY4121 YP_520354.1 hypothetical protein NC_002952.2859858.p0 Protein 8e-36 42
DSY4121 YP_520354.1 hypothetical protein NC_007622.3794948.p0 Protein 8e-36 42
DSY4121 YP_520354.1 hypothetical protein NC_003923.1003417.p0 Protein 8e-36 42
DSY4121 YP_520354.1 hypothetical protein NC_013450.8614146.p0 Protein 8e-36 42
DSY4121 YP_520354.1 hypothetical protein NC_002951.3238224.p0 Protein 8e-36 42
DSY4121 YP_520354.1 hypothetical protein AE015929.1.gene1106. Protein 3e-33 42
DSY4121 YP_520354.1 hypothetical protein NC_007793.3914065.p0 Protein 8e-36 42
DSY4121 YP_520354.1 hypothetical protein NC_002758.1121390.p0 Protein 8e-36 42
DSY4121 YP_520354.1 hypothetical protein NC_010079.5776364.p0 Protein 8e-36 42
DSY4121 YP_520354.1 hypothetical protein HE999704.1.gene1528. Protein 8e-34 42
DSY4121 YP_520354.1 hypothetical protein AE000516.2.gene3505. Protein 6e-40 42
DSY4121 YP_520354.1 hypothetical protein AF155139.2.orf0.gene Protein 5e-38 41
DSY4121 YP_520354.1 hypothetical protein CP001485.1.gene721.p Protein 1e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DSY4121 YP_520354.1 hypothetical protein VFG1702 Protein 6e-38 46
DSY4121 YP_520354.1 hypothetical protein VFG1563 Protein 6e-38 46
DSY4121 YP_520354.1 hypothetical protein VFG1389 Protein 1e-30 42