Gene Information

Name : DSY3872 (DSY3872)
Accession : YP_520105.1
Strain : Desulfitobacterium hafniense Y51
Genome accession: NC_007907
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 4428848 - 4429645 bp
Length : 798 bp
Strand : -
Note : similarity to COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components(Evalue: 4E-68)

DNA sequence : 
TTGGAGATGAACAAAGATTACATACTGGAGATCAAAGGACTGACGGTGGGCTATAAAGGCCGCAAGATCATCGATGACCT
GGATCTGGTTATCGAAAAAGGGAAGATCTATTCCATCATCGGTCCCAATGGCTGCGGCAAGACCACCCTGATGCGGACCA
TGAGCAGGAACCTTAAACCGCAAAAAGGGGAGATTCTTCTCGCCGGCAGCAACATCTTCACCATGGGAACCAAAAATGTA
GCCCGGAAGATGGCGGTTTTATCCCAAAGCAATACGACTATGAGTGATGCCACGGTCAGAGAACTTGTCCGCTTCGGCCG
CTTCGCCCATAAAACCTGGTGGAAGGGTTCCACTGCGGAGGACACGGGAATCGTGGAATGGGCCCTGGAGAAAACCGGCA
TGACCGGCTTGGCGGAGCGGAAAATCAACGCCCTATCCGGGGGAGAACGGCAAAGGGCCTGGATCGCCATGGCCATTGCC
CAAAAGCCGGAAATCCTGCTTCTGGACGAGCCCACCACCCATTTGGATATCTGTCATCAACTGGAGATCATGGAACTGGT
CGCCAAATTGAATCAGGAAGAGGGAATCACCATCCTGATGGTGCTCCATGATCTGAACCATGCGGCCAGATATTCCGATG
AGATCATTGTTCTCAAGGACCGCCGGATTTTCATCAAGGGAGATCCATGGGCCGTCTTGGCGAACCATGTTCTGGAGCAG
GTGTTCAGAGTGGAAGCTCAGATTCTTCAGGATCAGGATATAGACAAGCCGATCTTTTATGCCAGGAAAACCATTTAG

Protein sequence : 
MEMNKDYILEIKGLTVGYKGRKIIDDLDLVIEKGKIYSIIGPNGCGKTTLMRTMSRNLKPQKGEILLAGSNIFTMGTKNV
ARKMAVLSQSNTTMSDATVRELVRFGRFAHKTWWKGSTAEDTGIVEWALEKTGMTGLAERKINALSGGERQRAWIAMAIA
QKPEILLLDEPTTHLDICHQLEIMELVAKLNQEEGITILMVLHDLNHAARYSDEIIVLKDRRIFIKGDPWAVLANHVLEQ
VFRVEAQILQDQDIDKPIFYARKTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-44 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-44 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-44 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-44 44
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-48 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-46 41
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 7e-46 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 7e-46 41
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 6e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DSY3872 YP_520105.1 hypothetical protein BAC0164 Protein 1e-46 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DSY3872 YP_520105.1 hypothetical protein VFG0925 Protein 8e-48 44
DSY3872 YP_520105.1 hypothetical protein VFG1042 Protein 9e-47 41