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Name : DSY3426 (DSY3426) Accession : YP_519659.1 Strain : Desulfitobacterium hafniense Y51 Genome accession: NC_007907 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 3892406 - 3894106 bp Length : 1701 bp Strand : - Note : similarity to COG1961 Site-specific recombinases, DNA invertase Pin homologs DNA sequence : ATGTTAACGAACGCCCCGAGATTGGCGGGAAAGGAGCCAACCATGATGCGGACGGCGGCCGTTAAAAAGAAGAACATCTC CATGATACCGCCCCAGCCGGAATATGACCGGAGCATCAGGCCTCAGTTTAAGGCTCTGCGGGTTGCAGCCTACTGCCGCG TCAGCACCACCCAGGAGCAGCAGGAAACCAGTTACGAAGCCCAGATCTCATACTATACGGAAAAGATCAAAAGCAATCCC AACTGGAAGTTTGCCGGGATCTATGCTGATGACGGTAAGTCCGCAACCAATACCAAAAAGCGCAATGATTTCAATACCAT GATCGAGGACTGTTTGGCCGGAAAAATCGACATGGTCATCACCAAGTCGGTGAGCCGCTTCGCCCGAAACACCGTGGATA GCCTGCAGAATATCCGCAAACTCAAGGAGAAGAACATCGCCGTCTTCTTTGAAAAAGAGGGCATCAATACGCTGGAGGGC AGTGGCGAGCTTCTGATTACCATCTTAAGCAGCCAGGCTCAGGAAGAGAGCCGGAACCTCAGTGAAAACACCCGCTGGGG CCTGGTCAGACGCTTTGAAAAGGGCATCGTCTCGATCAACCACAATAAATTCTTAGGCTACACCAAGGACGAAAACGGCG AGCTGGTCATTGTGCCGGAGGAAGCGAAGCTGGTCCGGCGGATTTTCCTGCTTTATCTTGAAGGGAAAAGCCTTGCTAAA ATCTGCAAGATTTTAGAGTCGGAAGGGATCAGAACCGTTACCGGTTTAAAGAAATGGTGCTCCGGCGTCATTTATAAGAT GCTGAGCAACGAAAAATACATGGGTGATGTCCTCCAGCAAAAGAGCTATACCATTGATTACCTCAATAAAAAGCGAGTCA AGAATGACGGCATCGTCCCTCAGTATTACATCGAGGATGACCATGAAGCCATCATCCCCAAGGAGCTTTTCTACAGAGTA CAGGAGGAAAAAGCCAGACGGGCCGGTCTGAGAAAAACTACCGCTACCCGCAGGGCAAAGCAGGAGAAGGAGAAAAGCAA ATACAGCTCTATCTACGCCCTGTCGGATATCATGATCTGCAAGGAGTGCGGCCTGCCATACCGCAGGCAAATCTGGTCGA AATACGGACGGAAAAGCGCCGTGTGGCGCTGCGAGAACCGCCTGAAAAACGGTACTAAACACTGCAAGCACTCCCCCACT TTAAAAGAGGAAGTCCTGCAAGGAGCAGTCATGACCGCCATCAACAGTGTGGTGGAAAACCAGGGCGAGTTTGTCGGGGC CTTCCGGGAAAATGTGATCCGGGTCATCGGCAGTTACTCCACCAAAAACATACCCACCCCATATGACGGGGAGATTGAAA AACTGCAGAACCAGATGCTGGCCTTAATCGAAGAGAATGCCAGGAAGGGTTCGGTCACGGAAGAGTTTGACCAACAGTAT CAAGGAATCGCAATGCAGATCAAGGATCTCAAGCAGAAGAAGCTGGAGCTGGCTCGGGAACGAAAGCAGGCGGAAAGCAT TCAGCAGAGGGTGGTCGACATGGATGCCTACCTGAAGCGGACCACCTGCGAGGTGCGGGAGTTTGACGATGACTTAGTCC GCAGGCTTCTGCAGAACATCAGGGTCATCAATGATGAACTGCTGGAAATCCAGTTCAGGTCCGGAATTGTCATGAAGCAG CGGGTATCCTATTTTGATTGA Protein sequence : MLTNAPRLAGKEPTMMRTAAVKKKNISMIPPQPEYDRSIRPQFKALRVAAYCRVSTTQEQQETSYEAQISYYTEKIKSNP NWKFAGIYADDGKSATNTKKRNDFNTMIEDCLAGKIDMVITKSVSRFARNTVDSLQNIRKLKEKNIAVFFEKEGINTLEG SGELLITILSSQAQEESRNLSENTRWGLVRRFEKGIVSINHNKFLGYTKDENGELVIVPEEAKLVRRIFLLYLEGKSLAK ICKILESEGIRTVTGLKKWCSGVIYKMLSNEKYMGDVLQQKSYTIDYLNKKRVKNDGIVPQYYIEDDHEAIIPKELFYRV QEEKARRAGLRKTTATRRAKQEKEKSKYSSIYALSDIMICKECGLPYRRQIWSKYGRKSAVWRCENRLKNGTKHCKHSPT LKEEVLQGAVMTAINSVVENQGEFVGAFRENVIRVIGSYSTKNIPTPYDGEIEKLQNQMLALIEENARKGSVTEEFDQQY QGIAMQIKDLKQKKLELARERKQAESIQQRVVDMDAYLKRTTCEVREFDDDLVRRLLQNIRVINDELLEIQFRSGIVMKQ RVSYFD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1713 | YP_003446815.1 | site-specific recombinase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-119 | 48 |
| SSU05_0953 | YP_001198319.1 | DNA recombinase | Not tested | 89K | Protein | 4e-113 | 47 |
| SSU98_0960 | YP_001200518.1 | DNA recombinase | Not tested | 89K | Protein | 4e-113 | 47 |
