Gene Information

Name : DSY3342 (DSY3342)
Accession : YP_519575.1
Strain : Desulfitobacterium hafniense Y51
Genome accession: NC_007907
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 3783844 - 3784455 bp
Length : 612 bp
Strand : +
Note : similarity to COG2148 Sugar transferases involved in lipopolysaccharide synthesis(Evalue: 3E-39)

DNA sequence : 
ATGGGCTTTAAACGCCTTTTGGACCTCATCATCGCCATACCGTTGCTCATATTTATCTCGCCCCTTTGGCTTTTCATTGT
GATCTGGATTAAAGTGGATTCGCCAGGCCCGGCTATTTTTCGCCAGCAGCGGATAGGCCTTAGAGGAGAGCCTTTTACCA
TTTATAAATTCCGCACCATGGTACCGGATGCGGATCGAGTGATGAAAGCCAAGATCGAGCAGCTGAAAAAAGAAGGTAAA
TTCAATGCGGATGAATTCGTCTTCCAGGAAAAAGATGATCCCAGGATTACGGGAAGCGGCCGCTTTTTGCGCAAAACCAG
CCTTGATGAACTTCCCCAGCTCCTCAATATCGTCAATGGAACCATGAGCTTGGTGGGGCCTCGCCCTGAGGTGCCGGAGA
TTGTGGAGCAATACACCCCCGAACAACGCCAAAGGCTGAATATGCCTCCCGGCGTCACCGGCCTGGCCCAGATCAATGGC
CGCAGCGCCTTGACCTTGACCGAGACCTTAAAGTATGATGTTCAGTACGTGAAAAACTGGTCCCCGGGGGCGGATATTAA
GATTCTCTGGAAAACTATTTTTGTCGTGCTCCTGGGGAAGGATGCGTATTAA

Protein sequence : 
MGFKRLLDLIIAIPLLIFISPLWLFIVIWIKVDSPGPAIFRQQRIGLRGEPFTIYKFRTMVPDADRVMKAKIEQLKKEGK
FNADEFVFQEKDDPRITGSGRFLRKTSLDELPQLLNIVNGTMSLVGPRPEVPEIVEQYTPEQRQRLNMPPGVTGLAQING
RSALTLTETLKYDVQYVKNWSPGADIKILWKTIFVVLLGKDAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 3e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DSY3342 YP_519575.1 hypothetical protein VFG1309 Protein 1e-22 42
DSY3342 YP_519575.1 hypothetical protein VFG1369 Protein 5e-18 41