Gene Information

Name : DSY0010 (DSY0010)
Accession : YP_516243.1
Strain : Desulfitobacterium hafniense Y51
Genome accession: NC_007907
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 12071 - 13258 bp
Length : 1188 bp
Strand : -
Note : similarity to COG0582 Integrase(Evalue: 6E-23)

DNA sequence :
GTGGATGGTAAAAGAAAACCTAAATGGGTTTCTACCGGACTCCCGGTAGCGGGGACCAGCGACAGGAAAGCCCAAAAAGC
CTTTGACCAAATCCGGTTGGAATATGAACAGGAGCAGGAAGAAAAGGAGCGTCGGGAAGCCGAGGAACGAGCCAGAGAAC
AAATTGAGGGCAAACGGAATCCGCAAGCAGATGTATTATTTACCGACTACCTCCAAAAATGGCTAACTCAAGCAAAGCCT
ACGATAGCCAAAACAACATTCAAAGGCTATCAAACCATGCTGGACGGTCGGATCAGCCGGTATTTTACTGAGCTGAATAT
CACCTTGGGAGAGGTTACCCCACAGCACATCCAGGACTTTCATCAATCAATTTTTGATGAAGGACACACACCGAACACGG
TTATCCATTATCACGCAGTCCTACGCAGAGCATTGCAGAATGCAGTAAAAAAGGAGATCATCGACAGCAACCCTGCTGAC
CGGGTGGACAGGCCCAAGAAAAACGTGTACCATGCTCAGTTTTATTCCGCAGAGGAAATGATGGCACTGTTCGATGAGAT
ATCAGATGATCCCTTGGAGATTTGTGTGAAGCTGGCAGCTTACTATGGCTTGCGCCGAAGTGAAGTCCTCGGATTAAAGT
GGGATGCGATAAACCTTGAGCAAAAGACAATCTCCATCAAGCACAAGGTGATTGAGGACACGGTAGATGGCAAATCCATA
GCGGTCGGAGAAGATGTACTGAAAACCAAATCCAGCTTCCGCACCCTACCGTTACTGCCATCGGTGGAAAAGCTACTGCT
TGCAGAAAAGGAAAAGCAGGAAATGTACCGAAAGCTATTCAAGCGTTCCTACTGCCGAGATTACCTTGATTACATCTGCC
TCGACCAAGCGGGAAAACTCATGCGCCCCAATTATGTGACGGAACACTTTAGCTGGGCGCTTGAAAAAGCCGACCTCAAA
AAAATCCGTTTCCACGATTTAAGACATTCCTGCGCCAGCTTACTGCTTGCAAATGGGATATCAATGAAGCAAATCCAGAT
ATGGCTGGGACACAGCACTTTTTCGACCACAGCGGATATTTACTCTCATCTGGACTTCCATGCACAGATCGAATCCGGCT
TGGTTATGGATGGGATGTTTGAAAGAAACCGAGTGGCGGAACCTACTGGACTTGCAGCGGCCAACTGA

Protein sequence :
MDGKRKPKWVSTGLPVAGTSDRKAQKAFDQIRLEYEQEQEEKERREAEERAREQIEGKRNPQADVLFTDYLQKWLTQAKP
TIAKTTFKGYQTMLDGRISRYFTELNITLGEVTPQHIQDFHQSIFDEGHTPNTVIHYHAVLRRALQNAVKKEIIDSNPAD
RVDRPKKNVYHAQFYSAEEMMALFDEISDDPLEICVKLAAYYGLRRSEVLGLKWDAINLEQKTISIKHKVIEDTVDGKSI
AVGEDVLKTKSSFRTLPLLPSVEKLLLAEKEKQEMYRKLFKRSYCRDYLDYICLDQAGKLMRPNYVTEHFSWALEKADLK
KIRFHDLRHSCASLLLANGISMKQIQIWLGHSTFSTTADIYSHLDFHAQIESGLVMDGMFERNRVAEPTGLAAAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0479 NP_814262.1 phage integrase family site specific recombinase Not tested Not named Protein 5e-55 45
ef0001 AAM75207.1 putative integrase Not tested Not named Protein 4e-55 45