Gene Information

Name : DSY1003 (DSY1003)
Accession : YP_517236.1
Strain : Desulfitobacterium hafniense Y51
Genome accession: NC_007907
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 1207672 - 1208670 bp
Length : 999 bp
Strand : +
Note : similarity to COG0609 ABC-type cobalamin/Fe3+-siderophores transport systems, permease components(Evalue: 6E-69)

DNA sequence :
ATGAAATTAAGAAAAACAATGATCCTGGCGATCGCCGGTGTGCTGGGTGTAGTGTTGTGCATAGGGGCTTCGTTAGCCTT
GGGTTCACGCAATGTGGGTCTGGATGAAGTGATCAAGGCTTTGTTTTACTCCGGCAGTGATTCCTTTGACGCTCTGGTGG
TTCGGGAGCGGATTCCCCGCACGGTATTCAGCTTGCTCGCCGGGGCCTCCCTGGGGGTGGCCGGTGCTCTTATGCAGGCC
ATTACCCGCAACCCCATTGCCGATCCCAGTATTTTAGGGGTGAATACCGGTGCCTCTCTGTTTGTGGTGAGCGGAATCGC
TTTCTTTCAGATCAGCACTGCCGGTCAATATATTGGCTTTGCTTTAATGGGGGCTTTAGTGACGGCGGTCTTTGTTTACC
GAATCGGCTCCCTGGGCTATGGAGGAGCGACTCCTATCAAGCTGGCTCTGGCGGGAGCAGCTACCAGCGCGGCTTTATCC
TCTTTGGTCAGTGCCGTGATCCTTCCCCGGACCGAGGTTATGAATGCCTTCCGGTTTTGGCAGGTAGGCAGTGTCAGTGG
CGCTACCTGGGAAGGAATTCTGGCAGTGGCCCCCTTTCTGGCTCTGGGGTTAAGCATTGGCATGCTGACAGCCCCGGCCC
TGGATGCCTTGGCTTTGGGGGATGATGTGGCCACAGGGTTAGGGGTAAATACGGGAATGATCCGGATTGCCGGGGCAGTG
GCGGGAGTGCTGCTTTGTGGTGCCACAACAGCTCTGGCGGGGCCCATCGCCTTTGTCGGATTGATGATCCCCCATACCAT
GAGGCTGATCTGCGGGCCGGATATGAAGGTCATTATTCCCATGTCGGCACTGGGGGGGGCTATGCTTTTAACGATTTCCG
ATATTATCGGCAGGCTCATGGGTCAGCCCAGTGAACTGGAAGCTGGAATTGTCACGGCCTTTTTGGGAGCGCCGATTCTG
ATTATGATCGCCATGAGAACGAAGGTGCGTTCCTTATGA

Protein sequence :
MKLRKTMILAIAGVLGVVLCIGASLALGSRNVGLDEVIKALFYSGSDSFDALVVRERIPRTVFSLLAGASLGVAGALMQA
ITRNPIADPSILGVNTGASLFVVSGIAFFQISTAGQYIGFALMGALVTAVFVYRIGSLGYGGATPIKLALAGAATSAALS
SLVSAVILPRTEVMNAFRFWQVGSVSGATWEGILAVAPFLALGLSIGMLTAPALDALALGDDVATGLGVNTGMIRIAGAV
AGVLLCGATTALAGPIAFVGLMIPHTMRLICGPDMKVIIPMSALGGAMLLTISDIIGRLMGQPSELEAGIVTAFLGAPIL
IMIAMRTKVRSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 3e-37 48
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 3e-37 47
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 6e-16 42
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 6e-16 42
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 6e-16 42
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 6e-16 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DSY1003 YP_517236.1 hypothetical protein VFG0926 Protein 1e-18 42