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Name : Rfer_4341 (Rfer_4341) Accession : YP_516025.1 Strain : Genome accession: NC_007901 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : 2.7.7.7 Position : 105088 - 106386 bp Length : 1299 bp Strand : - Note : - DNA sequence : GTGTACGCCCTCGTTGATTGCAATAATTTTTATGCCAGCTGTGAACGCGTGTTTCGCCCCAGTTTGCGGGGCATACCTGT GGTCGTGCTCAGCAACAACGATGGCGCGTGCGTAGCGCGCAGCGATGAGGCTAAAAACCTTGGAATCAAGATGGGCGAGC CTTGGTTCAAGGTCCGTCACCTGGCGGAGTCCCATGGATTGGTCGCGTTGTCCGCCAACTTTGCACTCTACGGCGACATC AGCGATCGCGTGATGAGTCTGGCGGCCGGGCTCGGAGTCAAAACTGAAATCTATTCCATCGACGAATGCTTCGTCACCGT GGATGGGATTCCCGGCGACCTGGTCGCGCGAGCCCACAAAATTCGCGCACGGATACTCCAGTGGGTCGGAATTCCCTGTG GGATAGGCATCGGACCGACCAAAACGCTTGCGAAGCTGGCCAATCATGTCGCCAAGAGTGCCGAAAGGAAGCCAGGCAGC TACCCCGTGCACCTGGCCCAGGTGTGCGACCTTTCTGGACTGACGCCGCCAGAGTTGGAATCCGTGATGGCGGCCACCGA GATCAACGAAGTATGGGGCATTGGCCGGCAACTTACCAAGCAGCTAAACGAGTCCGGTATCACCACCGTTCTTGAATTGG TCCGCCTGGATCCGGCCATGGTCAGAGCCCGGTGGTCGGTCATCCTGGAGCGCACGGTGAGGGAGCTCCAGGGCACCTCA TGTATCGCATTCGATGACGCACCGTCGCCCAAGCAGGAGATCGCCTGTACGCGCTCGTTTGGGCATCCGGTTACGGAGTT GCGTGAGCTCAATGAGGCCGTTACCGAGTTCGCCAGTCGTGGCGCCGTCAAGCTGCGAAAACAAGGCAGTCAGGCCGGCC AAGTCATGGTGTTTATCCGCACCAGCCCATTTCGCAAGGATACGCAGTACAGCCGGTGCATCACGGTGCCGTTGCGGCGG CCCAGCGCAGATACCGCGGCGATTGTTGGCGCCGCTCTGTCTGGTCTGCGAGCGATCTACAAGCCCGGGTTCAAATATGC CAAGGCCGGTGTCATGCTGCTCGACCTGCAGTCGGACACAGTGCAACAAACCGAGCTCGATTTCGAGGAGGACGCCGGCC CAGATCGTGGCCGTCTCATGGCTTCCTTGGATGAGCTCAACCACCGGTACGGCCGGGGCACGGTGTTGATGGCCAGTGCC GGGCTGGCCGGAGATAGGCGGGTTTGGTCCATGAAACAGGAGCGCAGAACGCCGGGGTACACGACTTGCTGGGCAGAGAT CCCCGTTGCACGAGCTTGA Protein sequence : MYALVDCNNFYASCERVFRPSLRGIPVVVLSNNDGACVARSDEAKNLGIKMGEPWFKVRHLAESHGLVALSANFALYGDI SDRVMSLAAGLGVKTEIYSIDECFVTVDGIPGDLVARAHKIRARILQWVGIPCGIGIGPTKTLAKLANHVAKSAERKPGS YPVHLAQVCDLSGLTPPELESVMAATEINEVWGIGRQLTKQLNESGITTVLELVRLDPAMVRARWSVILERTVRELQGTS CIAFDDAPSPKQEIACTRSFGHPVTELRELNEAVTEFASRGAVKLRKQGSQAGQVMVFIRTSPFRKDTQYSRCITVPLRR PSADTAAIVGAALSGLRAIYKPGFKYAKAGVMLLDLQSDTVQQTELDFEEDAGPDRGRLMASLDELNHRYGRGTVLMASA GLAGDRRVWSMKQERRTPGYTTCWAEIPVARA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 5e-79 | 44 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 5e-79 | 44 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 1e-79 | 44 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 1e-62 | 41 |
