|
Name : clpB2 (CF0652) Accession : YP_515569.1 Strain : Chlamydophila felis Fe/C-56 Genome accession: NC_007899 Putative virulence/resistance : Virulence Product : ATP-dependent Clp endopeptidase ATP-binding chain B Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 754972 - 757512 bp Length : 2541 bp Strand : + Note : Hemolysin B, EC 3.4.21.92 DNA sequence : ATGTTTGAGAAGTTTACTAACAGAGCAAAACAAGTCATTAAATTGGCTAAAAAAGAGGCTCAGAGGTTAAATCATAACTA TCTAGGCACAGAGCATATACTCTTAGGCTTACTCAAACTAGGTCAGGGCGTAGCCGTAAATGTACTGCGCAACTTAGGAG TAGATTTTGACACTGCGAAACAAGAAGTCGAGCGTCTGATCGGTTATGGACCTGAAATCCAGGTCTATGGTGATCCTGCC CTTACTGGAAGAGTAAAAAAATCTTTTGAATCTGCAAATGAAGAAGCTGGGGTTTTAGAACATAATTACGTAGGTACTGA ACATCTTCTCTTAGGCATCTTAAATCAAGCCGATGGAGTTGCTTTACAGGTTTTAGAAAACTTACATATTGATCCCAGAG AAGTTCGTAAGGAAATTCTTAAGGAATTAGAAACATTCAATCTTCAACTTCCCCCATCATCATCTTCTTCTAATCCTAGA GGAAATTCATCTTCATCCTCTAAATCTTCTTCCCTAGGTCATACTCTGGGAGGAGAAAAAAATGATAAGTTATCGGCATT AAAAGCTTACGGTTATGATTTAACCGAAATGTTTCGTGAGTCTAAGCTTGATCCTGTCATAGGTCGTTCTACGGAAGTAG AGCGCCTGATCCTTATCCTATGTCGCAGAAGAAAAAATAACCCTGTACTTATCGGGGAAGCTGGTGTAGGTAAAACGGCT ATCGTTGAAGGATTAGCGCAAAAGATCATTTCCAATGAAGTTCCCGATACTTTACGCAAAAAACGTTTAATTACCCTAGA TCTTGCCTTAATGATTGCAGGAACTAAATATCGCGGTCAATTTGAAGAACGTATCAAAGCAGTTATGGATGAAGTCCGCA AACACGGAAACATCCTTTTATTTATCGATGAGCTACATACAATCGTAGGTGCGGGTGCTGCTGAAGGAGCTATTGATGCT TCTAACATCTTAAAACCAGCTCTAGCACGTGGAGAAATTCAGTGTATTGGAGCCACAACAATTGATGAATACCGCAAGCA TATTGAAAAAGATGCTGCTTTAGAACGCAGATTCCAAAAAATTATTGTGCACCCACCTAGTGTAGATGAAACTATAGAAA TTCTACGTGGGTTAAAAAAGAAATACGAAGAGCATCATAATGTTTCTATTACAGAAGAAGCATTGAAAGCTGCGGCCACT TTATCTGATCAGTATGTTCACGGTCGTTTCCTTCCAGACAAAGCTATTGATTTGCTTGATGAGGCTGGAGCGCGTGTACG TGTCAATACCATGGATCAGCCTACAGAGTTAATGAAACTCGAAGCTGAGATTGAAACTACGAAGCTCGCTAAAGAGCAAG CGATTGGCACACAAGAATACGAAAAGGCGGCAGGATTACGCGACGAAGAGAAAAAGCTTCGAGAACGTCTCTCCAACATG AAACAAGAATGGGAAAATCACAAAGAAGAGCATCAGATTCCCGTGGATGAGGAAGCAGTTGCTCAAGTGGTCTCCTTACA AACAGGTATTCCTTCCGCAAGGCTTACTGAAGCTGAAAGTGAAAAGTTACTTAAGTTAGAAGATACTCTACGTAAAAAAG TCATAGGTCAAGATCAGGCAGTAGCAAGCATTTGCCGAGCTATTCGTCGTTCAAGAACTGGCATTAAAGATCCCAACCGT CCAACAGGCTCATTCTTATTCCTAGGCCCCACTGGAGTAGGGAAAACGTTGCTAGCTCAACAGATTGCCATCGAAATGTT TGGTGGTGAGGATGCTTTAATTCAAGTAGATATGTCTGAGTACATGGAGAAGTTCGCCGCCACCAAAATGATGGGATCGC CTCCAGGGTACGTTGGTCACGAGGAAGGTGGTCATCTTACGGAACAAGTACGTCGTCGTCCTTACTGTGTTGTTTTATTC GATGAGATTGAAAAAGCTCATCCCGACATTATGGACTTAATGTTGCAAATTCTAGAGCAAGGACGTCTTACAGACTCGTT TGGTCGCAAGATTAATTTCCGTCATGCGATCATTATCATGACTTCGAACTTAGGTGCGGACTTAATTAAAAAGAGTGGGG AAATTGGTTTTGGCACTCGATCGAATTTTGATTACAAAGTCATCCAAGAAAAAATCGAAAATGCTGTGAAGAAGCATTTA AAACCGGAGTTTATCAACCGTTTGGATGAAAGTGTCATCTTCCGTCCTTTAGAGAAAGATGCTTTATCTCAGATTATCCA TTTAGAAATTAATAAACTGGATTCCCGTTTGAAAAATTACCAAATGGCTTTAAGCATTCCAGATTCCGTGATTTCTTTCT TAGTTACGAAAGGCCACTCTCCAGAAATGGGAGCACGACCCTTACGTCGAGTTATTGAGCAGTATCTTGAAGATCCTCTT GCGGAGCTTTTGCTTAAGGAGTCTTGCCGTCAAGAAGCGAGAAAGCTTCGTGCTAGTCTCACAGAAGATCGAGTAACTTT CGAGCGCGAGGAAGAACAATCTGAAAGTATTCCGGCAACTATACCGACTGGGGAGTCATAG Protein sequence : MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRNLGVDFDTAKQEVERLIGYGPEIQVYGDPA LTGRVKKSFESANEEAGVLEHNYVGTEHLLLGILNQADGVALQVLENLHIDPREVRKEILKELETFNLQLPPSSSSSNPR GNSSSSSKSSSLGHTLGGEKNDKLSALKAYGYDLTEMFRESKLDPVIGRSTEVERLILILCRRRKNNPVLIGEAGVGKTA IVEGLAQKIISNEVPDTLRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDA SNILKPALARGEIQCIGATTIDEYRKHIEKDAALERRFQKIIVHPPSVDETIEILRGLKKKYEEHHNVSITEEALKAAAT LSDQYVHGRFLPDKAIDLLDEAGARVRVNTMDQPTELMKLEAEIETTKLAKEQAIGTQEYEKAAGLRDEEKKLRERLSNM KQEWENHKEEHQIPVDEEAVAQVVSLQTGIPSARLTEAESEKLLKLEDTLRKKVIGQDQAVASICRAIRRSRTGIKDPNR PTGSFLFLGPTGVGKTLLAQQIAIEMFGGEDALIQVDMSEYMEKFAATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVVLF DEIEKAHPDIMDLMLQILEQGRLTDSFGRKINFRHAIIIMTSNLGADLIKKSGEIGFGTRSNFDYKVIQEKIENAVKKHL KPEFINRLDESVIFRPLEKDALSQIIHLEINKLDSRLKNYQMALSIPDSVISFLVTKGHSPEMGARPLRRVIEQYLEDPL AELLLKESCRQEARKLRASLTEDRVTFEREEEQSESIPATIPTGES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB2 | YP_515569.1 | ATP-dependent Clp endopeptidase ATP-binding chain B | VFG0079 | Protein | 0.0 | 51 |
| clpB2 | YP_515569.1 | ATP-dependent Clp endopeptidase ATP-binding chain B | VFG0080 | Protein | 1e-145 | 49 |
