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Name : clpB1 (CF0378) Accession : YP_515295.1 Strain : Chlamydophila felis Fe/C-56 Genome accession: NC_007899 Putative virulence/resistance : Virulence Product : ATP-dependent Clp endopeptidase ATP-binding chain B Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 441427 - 444021 bp Length : 2595 bp Strand : + Note : Hemolysin B, EC 3.4.21.92 DNA sequence : ATGGATAAGATTTCGGATGCGGTAAGCGAAGCTCTAGAAAAAGCTTTTGAGCTCGCTAAATCAGCAAAAAATCCTTATGT AAGTGAAAACCATTTTCTTAAATGTCTTTTAGAAAATACTGAGTCATTATTTTATTTGATAATAAAAGACATACAAAGCA ACCCCAAATTACTTATTACTGCAGTGGACGAGGCCCTTTCTCTAGAGCCCTCTGTTGTCAGTGGAGATGCTATGCCTAAG CCTTCTCCAGGGCTACAAAGTCTACTTTTAGATGCTAGGCAAACGGCTAAAGATCTCGGAGATGAGTACCTTTCTGGAGA TCATGTACTCCTAGCTTTTTGGAAATCCAATAAGGAGCCTTTCGCTTCTTGGAAAAAAACGGTAAAAGTATCCTTAGATG ATCTCAAGAAACTCATTATTAATATAAGGCGTGGAAATCGTATGGACTCTCCTAGCGCAGAAAATAATCTTCGGGGCCTA GAAAAGTATTGTAAGAACTTAACCTCGTTAGCAAAAGATGGAAAATTAGATCCTGTGATTGGTAGGGACGAAGAAATTCG TCGTACAGTTCAAGTTTTATCACGAAGAACTAAAAATAACCCCATGCTTATAGGTGAGCCTGGAGTTGGGAAAACAGCAA TTGCTGAGGGGCTGGCCCTGCGTATTATTCAGGGGGATGTGCCAGAAAGCTTAAAAGGTAAACAGCTCTACGTTTTGGAT ATGGGAGCATTAATTGCCGGAGCAAAATATCGCGGAGAATTCGAAGAGCGCTTAAAAAGTGTGCTTAAAGATGTAGAGTC TGTGGATGGTGAGAGTATTTTATTCATTGATGAAGTGCATACTCTTGTAGGTGCTGGAGCTACTGATGGTGCTATGGATG CTGCAAATTTATTAAAGCCCGCTTTAGCAAGAGGTACTCTGCATTGTATCGGAGCTACAACTCTTAATGAATACCAAAAA TATATAGAAAAAGATGCCGCTTTAGAACGGCGTTTCCAGCCTATTTTTGTAACAGAACCTTCTTTAGAAGACGCCGTGTT TATTCTTCGCGGTCTTCGTGAGAAGTATGAAATTTTCCATGGCGTGCGTATTACTGAGGGAGCATTAAATGCTGCCGTTC TTCTTTCTTATAGATATATTCCCGATCGTTTTCTTCCAGATAAGGCGATTGACTTGATAGACGAGGCTGCAAGTTTAATT CGCATGCAAATCGGAAGTTTGCCCCTGCCTATCGATGAGAAAGAGCGGGAACTCGCTGCTTTGATTGTTAAGCAAGAAGC CATAAAACGTGAAAAAGCTCCTTCATATCAAGAAGAAGCGGAGGCTATGCAGCAGTCTATAGATCAGCTTAAGGAAGAGT TGGCAGTTTTGCGTCTGCGTTGGGATGAGGAGAAAAAACTTATCTCAGGCCTTAAGGAGAAAAAGAATTCTTTAGAAAAT ATGAAGTTTTCTGAAGAAGAAGCTGAACGCGTTGCTGATTACAATCGTGTAGCAGAGCTACGCTATAGTTTAATTCCTGC TCTTGAAGAAGAAATTCGTCAAGATGAAGAAGCTTTAAATCAAAGAGACAATCGCCTTCTTCAAGAAGAAGTGGATGAGC GTCTTATTGCTCAGGTAGTGGCAAATTGGACAGGAATTCCTGTTCAGAAAATGTTAGAAGGCGAAGCCGAGAAGCTTCTC GTTTTAGAAGAGTCTTTAGAAGAGCGCGTTGTTGGTCAGCCATTTGCTATTGCAGCTGTTAGTGATTCTATACGTGCTGC CCGTGTAGGACTTAGTGATCCTCAACGACCTTTAGGAGTTTTCTTATTTTTGGGGCCTACGGGAGTGGGGAAAACAGAAC TTGCTAAAGCTCTCGCAGATCTTTTGTTTAATAAAGAAGAGGCGATGGTACGCTTTGACATGACCGAATATATGGAAAAA CATTCCGTATCCAAATTGATAGGATCGCCTCCAGGTTATGTAGGTTACGAAGAAGGGGGAAGTCTTTCTGAAGCTTTACG TCGACGTCCTTATTCCGTCGTGCTGTTTGATGAAATTGAAAAAGCAGATAAAGAAGTATTTAATATTCTCTTGCAAATCT TTGATGAAGGCATTCTTACGGATAGTAAAAAGCGTAAGGTAAATTGTAAAAATGCCTTATTCATTATGACTTCAAATATA GGTTCTCAAGAACTTGCCGATTACTGCGCTAAGAAGGGAAGAGAGGTAAGTAAGGAGACTGTATTATCGGTAGTTTCCCC AGAATTAAAGAAATACTTCAGTCCAGAGTTTATCAATCGTATTGATGATATTCTTCCTTTTGTTCCTTTGAATACCGAAG ATATTGTAAAAATTGTCGGTATTCAGATGCGTAGAGTGGCTCAACGCTTGTTAGAAAGACGTGTAACATTAACTTGGGAT GATTCTGTGATACTCTATTTAAGTGAGCACGGTTATGACAGTTCCTTTGGAGCACGGCCCTTAAAACGGTTAATTCAACA GAAGGTAGTCACCTTGTTATCAAAAGCTTTGCTTAAAGGCGATATTAAATCAGATACGTCTATAGAGCTTACAATGTCTC GGGATGTCTTGCTTTTCAAAAAAGTTAGCGGTTAG Protein sequence : MDKISDAVSEALEKAFELAKSAKNPYVSENHFLKCLLENTESLFYLIIKDIQSNPKLLITAVDEALSLEPSVVSGDAMPK PSPGLQSLLLDARQTAKDLGDEYLSGDHVLLAFWKSNKEPFASWKKTVKVSLDDLKKLIINIRRGNRMDSPSAENNLRGL EKYCKNLTSLAKDGKLDPVIGRDEEIRRTVQVLSRRTKNNPMLIGEPGVGKTAIAEGLALRIIQGDVPESLKGKQLYVLD MGALIAGAKYRGEFEERLKSVLKDVESVDGESILFIDEVHTLVGAGATDGAMDAANLLKPALARGTLHCIGATTLNEYQK YIEKDAALERRFQPIFVTEPSLEDAVFILRGLREKYEIFHGVRITEGALNAAVLLSYRYIPDRFLPDKAIDLIDEAASLI RMQIGSLPLPIDEKERELAALIVKQEAIKREKAPSYQEEAEAMQQSIDQLKEELAVLRLRWDEEKKLISGLKEKKNSLEN MKFSEEEAERVADYNRVAELRYSLIPALEEEIRQDEEALNQRDNRLLQEEVDERLIAQVVANWTGIPVQKMLEGEAEKLL VLEESLEERVVGQPFAIAAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMTEYMEK HSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVFNILLQIFDEGILTDSKKRKVNCKNALFIMTSNI GSQELADYCAKKGREVSKETVLSVVSPELKKYFSPEFINRIDDILPFVPLNTEDIVKIVGIQMRRVAQRLLERRVTLTWD DSVILYLSEHGYDSSFGARPLKRLIQQKVVTLLSKALLKGDIKSDTSIELTMSRDVLLFKKVSG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-101 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB1 | YP_515295.1 | ATP-dependent Clp endopeptidase ATP-binding chain B | VFG2084 | Protein | 1e-100 | 41 |
| clpB1 | YP_515295.1 | ATP-dependent Clp endopeptidase ATP-binding chain B | VFG2076 | Protein | 8e-115 | 41 |
