|
Name : rplS (CF0356) Accession : YP_515273.1 Strain : Chlamydophila felis Fe/C-56 Genome accession: NC_007899 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 419199 - 419567 bp Length : 369 bp Strand : + Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGGGGAACTTAATTAAGGAATTGCAAGACGAACAACTTCGAAAAGAAGATTTGGAAGATTTTCGTGTTGGAGACACCAT TCGTGTAGCTACAAAAATTGTGGACGGTGGTAAAGAACGTACACAAGTATTTCAAGGTACTGTGATGGCTCGTAGAGGTG GCGGAGCAGGAGAAACCGTTTGTTTGCACCGAGTAGCTTATGGCGAAGGTATGGAAAAGAGTTTCTTACTTCATAGTCCT AAGATTGTAGGTATTGAAGTAGTGAAACGTGGTAAGGTTTCTCGAGCTCGTCTGTACTACTTGAAAGGTAAGACTGGTAA GGCTGCTAAAGTTAAAGAGTATATTGGTCCTAGATCTTCTAAAAAATAG Protein sequence : MGNLIKELQDEQLRKEDLEDFRVGDTIRVATKIVDGGKERTQVFQGTVMARRGGGAGETVCLHRVAYGEGMEKSFLLHSP KIVGIEVVKRGKVSRARLYYLKGKTGKAAKVKEYIGPRSSKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 2e-25 | 47 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 1e-20 | 44 |
