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Name : fliP (Jann_4178) Accession : YP_512120.1 Strain : Jannaschia sp. CCS1 Genome accession: NC_007802 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 4287218 - 4287949 bp Length : 732 bp Strand : - Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGCGGCGGCCTGACCTTACCCGTTGTCTTGTTGTCGCTGCCCTTCTCGCGATCAGCTGGCCCAGCGCCGCCATCGCACA GGAGATCTCCCTTGATCTAGGTGATGGGAGCAGCCTGACGGCGCGATCGTTCCAGTTGATCGCGCTGATTTCAGTTCTCA GCCTGGCACCGGGGTTGGCTGTTATGGTCACCTGCTTCCCGTTTGTTGTCACGGTGTTGTCAATCCTGAGGCAGGCGATC GGTCTGCAACAGTCACCTCCCAACATGCTGATCGTCAGCCTTGCACTTTTCTTGACGTATTTCGTGATGGCTCCGGTATT TGAGGAAGCGTATCGCGCCGGCATCGCTCCGCTGATTGCAGGAGAGCTGACCCCGGATGCCGCGATCCCGCTGATCTATG AGCCTTTTCGGGGCTTCATGCTGAACCGCGTGGACACATCAACGCTGGTCAGCTTGGCAGAATTGCGGCCCGGTGCCGAC GCTGCAAATCCGGATCCGTCCGTCTTGATTCCGTCGTTCATGTTGAGCGAAGTCGAACGCGCGTTTCAAATCGGATTCCT CGTTTTTCTGCCCTTCCTCGTCATCGACTTGGTCGTGGCAGCGATTCTCATGTCGATGGGCATGATGATGGTACCCCCCG CAATCGTGTCGCTGCCGTTCAAGCTGGCATTTTTCGTTGTTGCTGACGGGTGGGCCCTGATTACGGGCGCTCTGGTCCGC AGTTATTTCTAG Protein sequence : MRRPDLTRCLVVAALLAISWPSAAIAQEISLDLGDGSSLTARSFQLIALISVLSLAPGLAVMVTCFPFVVTVLSILRQAI GLQQSPPNMLIVSLALFLTYFVMAPVFEEAYRAGIAPLIAGELTPDAAIPLIYEPFRGFMLNRVDTSTLVSLAELRPGAD AANPDPSVLIPSFMLSEVERAFQIGFLVFLPFLVIDLVVAAILMSMGMMMVPPAIVSLPFKLAFFVVADGWALITGALVR SYF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 2e-30 | 44 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 1e-28 | 43 |
| hrcR | NP_640757.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 8e-29 | 43 |
| hrcR | AAD21321.1 | HrcR | Virulence | Hrp PAI | Protein | 6e-29 | 43 |
| hrcR | YP_362153.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 8e-29 | 43 |
| hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-28 | 42 |
| XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 8e-29 | 42 |
| hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 8e-29 | 42 |
| hrcR | YP_198720.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 1e-28 | 42 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 3e-28 | 42 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 4e-26 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_512120.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 9e-42 | 46 |
| fliP | YP_512120.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 6e-40 | 44 |
| fliP | YP_512120.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 7e-42 | 44 |
| fliP | YP_512120.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 6e-40 | 42 |
| fliP | YP_512120.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 4e-28 | 41 |
| fliP | YP_512120.1 | flagellar biosynthesis protein FliP | VFG0188 | Protein | 2e-28 | 41 |
