Gene Information

Name : Jann_3987 (Jann_3987)
Accession : YP_511929.1
Strain : Jannaschia sp. CCS1
Genome accession: NC_007802
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 4091644 - 4094259 bp
Length : 2616 bp
Strand : -
Note : -

DNA sequence :
ATGAACTTAGAAAAGTTCACCGACCGCGCACGCGGCTTCCTTCAGGCCGCACAAACCATCGCGCAGCGCGAGGATCACCA
GAAACTGGTGCCCGAGCATCTTTTGAAGGCCCTGCTAGACGATGACGAAGGTCTGGCCAGCACCCTGATCGGACGCTCTG
GCGGCACGCCCGCGCGGGTCCGTGAGTCGCTGGACGCGACCATGGCCAAGCTGCCCGTCGTCACCGGCGACGGCGCGCAG
GTCTATATGGACAAGCAATTGGGCAAGGTCCTGGATGAGGCCGAGAAGCTCGCCACCAAGGCCGGCGACAGTTTCGTGCC
CGTCGAACGGCTGCTGACCGCGCTCGCCATGGTCAAATCCGGCGCGAAGGATGCGCTGGACAAGGGCGGCGTGAACGCGC
AGGCCCTCAACGCTGCGATCAATGATCTGCGCAAGGGCAAGACCGCCGATTCAGCCTCTGCCGAAGACAATTACGACGCG
CTCAACAAATACGCCCGTGACCTGACGGAGGCTGCGCGGGAGGGCAAGATTGACCCGATCATTGGCCGCGACGAAGAAAT
CCGCCGCGCCATGCAGGTGCTGTCACGCCGGACCAAGAACAACCCTGTCCTGATCGGGGAACCCGGCGTCGGCAAAACTG
CCATCGCCGAAGGCCTCGCCCTGCGGATCATCAACGGCGACGTCCCCGAAAGCCTGCGCAACAAGACGCTGATGTCGCTC
GACATGGGCGCGCTGATCGCGGGCGCGAAGTACCGTGGCGAGTTTGAAGAACGCCTGAAAGCCGTCCTGACCGAAATCGC
CGATGCGGCCGGTGAAATCATCCTGTTCATTGACGAGATGCACACCCTTGTGGGCGCGGGCAAAGCGGACGGGGCGATGG
ATGCCGCCAACCTGATCAAGCCCGCCCTGGCGCGCGGCGAATTGCATTGCGTCGGCGCCACGACGCTGGATGAATACCGC
AAATATGTGGAAAAGGACGCCGCTTTGGCGCGCCGGTTCCAGCCTTTGGTGGTGGAAGAACCGACGGTGGATGACACCGT
CTCCATCCTGCGCGGGATCAAGGAAAAGTACGAGTTGCACCACGGTGTTCGCATCAGTGACAGCGCGTTGGTTGCCGCTT
CAAACCTGTCGCATCGGTATATCACGGACCGGTTTCTGCCCGACAAGGCCATCGACCTGATGGACGAAGCGGCGTCCCGT
CTGCGGATGGAAGTGGACAGCAAGCCCGAAGAATTGGACGCGCTGGACCGTCAGATCCTGCAAATGCAGATCGAGGCGGA
GGCGTTGAAGCAGGAATCCGATACGGCGTCGAAGGACCGGCTTGAGACGCTTGAAAAAGACCTCGGCGATTTGCAACAGC
AATCCGCGGAAATGACCGCCAAGTGGCAGGCGGAGCGGGACAAGTTGGAATCCGCGCGCGGGTTGAAGGAACGCCTTGAC
CATGCCCGCGCGGAGTTGGATCAGGCCAAGCGCAACGGTGATCTCGGCAAAGCGGGGGAGCTGTCCTATGGCGTGATCCC
GCAGCTGGAAAAGGAGCTGGAGGTCGCAGAGGCGCAGCCCGATGACGTCATGGTGGAAGAGGCCGTTCTGCCCGAACAGA
TCGCCGAAGTGGTGGAGCGGTGGACCGGCGTGCCGGTCGCCAAGATGCTGGAAGGCGAACGCGAAAAGCTCCTGCGCATG
GAAGACGAACTTGGCAAGCGCGTCATCGGCCAGCATCAAGCGGTCTCCGCCGTGTCCCGGGCCGTCCGTCGTGCCCGCGC
GGGCTTGCAGGATGAGGGGCGTCCCTTGGGCAGCTTCCTGTTCCTCGGGCCCACGGGTGTCGGCAAGACCGAGTTGACCA
AGGCGCTTGCCGAATACCTCTTTGATGATGATCAGGCCATGGTCCGCATCGACATGTCGGAATTCATGGAAAAACACGCG
GTGGCCCGTCTGATCGGCGCGCCTCCGGGCTATGTCGGCTATGACGAGGGCGGCGTGCTGACCGAAGCGGTGCGGCGTAG
GCCCTATCAGGTGATCCTGTTTGATGAGGTCGAAAAGGCGCATCCGGAGGTCTTCAACGTGCTTCTTCAGGTGCTGGATG
ATGGCATTCTGACCGATGGTCAGGGCCGTCAGGTGGACTTCAAGCAGACCTTGATCGTGCTGACGTCAAATCTTGGCAGC
CAGGCGCTGAGCCATCTGCCCGAGGGCAGTGACGCGGCGCAGGCGCAGCGCGATGTGATGGACGCCGTGCGCGCCCATTT
CCGGCCGGAATTCCTGAACCGTCTGGATGATATGATCGTCTTCGACCGCCTGACGCGGGCGGATATGGATGGTATCGTCA
AGATCCAGCTGGGGCGCCTGGAACGTCGTCTGGCCGAGCGGAAAATCCAGCTGACCTTGGACGAGGCCGCGCAGACCTGG
CTTGCGGATGAAGGGTATGACCCGGTCTTCGGGGCCCGTCCGCTGAAGCGGGTGATCCAGCGCGCGTTGCAGGACCAGCT
GGCCGAAATGATCCTGGCGGGCGATGTGACCGACGGCGCGGATATCACGGTCAGCGCCGGGGCCGATGGGCTGATCGTGG
GCGACCGCGTGGCCCCGTCCAACCGACCCAAGCCCGACGATGCCGTGGTCCATTAG

Protein sequence :
MNLEKFTDRARGFLQAAQTIAQREDHQKLVPEHLLKALLDDDEGLASTLIGRSGGTPARVRESLDATMAKLPVVTGDGAQ
VYMDKQLGKVLDEAEKLATKAGDSFVPVERLLTALAMVKSGAKDALDKGGVNAQALNAAINDLRKGKTADSASAEDNYDA
LNKYARDLTEAAREGKIDPIIGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIINGDVPESLRNKTLMSL
DMGALIAGAKYRGEFEERLKAVLTEIADAAGEIILFIDEMHTLVGAGKADGAMDAANLIKPALARGELHCVGATTLDEYR
KYVEKDAALARRFQPLVVEEPTVDDTVSILRGIKEKYELHHGVRISDSALVAASNLSHRYITDRFLPDKAIDLMDEAASR
LRMEVDSKPEELDALDRQILQMQIEAEALKQESDTASKDRLETLEKDLGDLQQQSAEMTAKWQAERDKLESARGLKERLD
HARAELDQAKRNGDLGKAGELSYGVIPQLEKELEVAEAQPDDVMVEEAVLPEQIAEVVERWTGVPVAKMLEGEREKLLRM
EDELGKRVIGQHQAVSAVSRAVRRARAGLQDEGRPLGSFLFLGPTGVGKTELTKALAEYLFDDDQAMVRIDMSEFMEKHA
VARLIGAPPGYVGYDEGGVLTEAVRRRPYQVILFDEVEKAHPEVFNVLLQVLDDGILTDGQGRQVDFKQTLIVLTSNLGS
QALSHLPEGSDAAQAQRDVMDAVRAHFRPEFLNRLDDMIVFDRLTRADMDGIVKIQLGRLERRLAERKIQLTLDEAAQTW
LADEGYDPVFGARPLKRVIQRALQDQLAEMILAGDVTDGADITVSAGADGLIVGDRVAPSNRPKPDDAVVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-163 45
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-102 42
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-103 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 1e-103 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Jann_3987 YP_511929.1 ATPase VFG2076 Protein 2e-119 43