|
Name : Jann_2503 (Jann_2503) Accession : YP_510445.1 Strain : Jannaschia sp. CCS1 Genome accession: NC_007802 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 2500918 - 2503020 bp Length : 2103 bp Strand : - Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : ATGCCTGATCACATTCCAAAAGGCCGCCCTGAGATCCTGTTTCCCCTCTTTGCGGGGCTGGAAACCTTGGACGGGATCGG CCCCAAGACCGCGAAAAATTACGCGGGCCTTGATGTCGAAACGCCCCGCGATCTGATTTTTACGCTGCCCGCTGGCGGCC TTGACCGCACGCGCCGCGCCTCCATCCGAGATGTCGCACTGCCCGGTCCCGCGACGGTGGAGGTGACGATCGGCACCCAT ATCAAGCCCCAGGGACGGGGGCCGTACCGGATTGAGGTGGAGGACGCGAAAACCTCCTTCCACCTCGTGTTTTTCCATGC GCGCGGCGATTATCTGGAGCGGGCGCATCCGACAGGCGCGCGGCGCGTCATCTCTGGCAAGGTGGAGCTATATGACGGCA TCGCCCAGATGGCGCATCCCGACCATATGCTCCCACCCGAGGAGGCCGCGAGCATCCCGGAATATGAGCCCGTCTATCCG CTGTCCCAAGGCCTGACGCAGCGGGGCGTCCACAAGGCGGTGCAATCGGCATTGACCAAGATTGAATATCTCGGCGAATG GATTGATCTGGAGACGGCGAAGGAGCGCAACTGGCCCGCCTGGGCCGACGCGATCCAGGCTGTCCATGCCCCGCAATCGT CCAGTGACATCAGCCGCGCCGCCTTGCCGCGCGAGCGGTTGGCCTATGACGAGTTCTTCGCCCATCAACTCACCCTCGCG CTTGCCCGCGCCACCCGCCGCCGCAAGCCGGGATTGAGCAGCACAGGCGACGGTCGATTGCGCGCCAAGGTGTTGACCGC GCTGCCCTATACGCCCACGGGCGCGCAGACCCGAACAATCAAGGAAATCGCGGATGACATGGCGGCACCGCACCGGATGA GCCGGCTTTTGCAAGGCGATGTCGGCGCGGGCAAGACGCTGGTGGCGCTGATGGCGCTTCTGGTGGCCGTGGAGGCCGGG GGGCAGGCGGTCATGATGGCCCCCACGTCGATCCTTGCGGGGCAGCATTACCTGAACCTCAAGCCCCTTGCGGACCATGC GGGTGTTGTGTGCGAAATCCTGACCGGGGCTGACAAGGGGCGGGAGCGGGATGCCAAGCTCAACGCCCTCAAGCGCGGTG ATATCCATATTCTGGTCGGCACCCATGCCGTGTTCCAGGATGACGTGGCGTTTGACGACCTGCGCCTTGCGGTTGTCGAT GAGCAGCACCGCTTCGGGGTTCGGGAACGGGTGCGTTTGAGTCAGAAGGGGGAGGCGGCGGACATCCTCGTGATGACCGC CACGCCCATCCCCCGCACGCTGAGCCTTGCGCAATATGGCGATATGGACCTGAGCGTGCTGGACGAAAAGCCTCCCGGTC GCACGCCGGTGAAGACGGCTCTGATCTCCACCGCGCGGCTGGATGAAGTGGTTGACCACATGCGCCGCGCGCTGGACGAA GGACGGCAGGCCTATTGGGTGTGCCCGCTGGTCGAGGAATCCGAGGTCTATGACGCGACCGCGGCGGAGGAGCGGTTCAA AATGCTGCGCGCGGCCTTTGGCGAGGGCAAGGTGGCGCTGATCCATGGACGGATGAAGCCGAAGGAGAAGGACGCGATCA TGGCCGCCTTCAAGGCAGGCGAGACGCGCGTGCTGGTCGCCACAACGGTGATCGAGGTCGGCGTCGACGTGCCCAACGCG TCCATCATGGTGATTGAGCAGGCCGAAAACTATGGCCTTGCGCAGTTGCATCAACTGCGCGGCCGGGTGGGGCGTGGTGC GGCGGACTCGACGTGTCTTCTGATGTACCGCGCGCCCTTGGGGGACACGGCGACCCGCCGGTTGCAGGTGATGCGAGAGA CCGAGGATGGGTTCCGGATTTCAGAGGAAGATCTGGCAATCCGGGGCGCGGGCGATCTGATCGGCACAGCGCAGTCGGGC CTGCCCCGGTTCCGCGTGGCAGATATGGAAAGCCAGGCCGCCTTGATGGCCTTGGCCCAGACCGATGCGCGGGCTTTGCT GACGCTGGATCCGGCCCTGGAGGGCGCGCGGGGACAGTCCGCCCGCGTGCTGCTGTGGCTGATGGAGCAGGACAAGGCGA TCCGCCTGCTAAACGTGGGGTAA Protein sequence : MPDHIPKGRPEILFPLFAGLETLDGIGPKTAKNYAGLDVETPRDLIFTLPAGGLDRTRRASIRDVALPGPATVEVTIGTH IKPQGRGPYRIEVEDAKTSFHLVFFHARGDYLERAHPTGARRVISGKVELYDGIAQMAHPDHMLPPEEAASIPEYEPVYP LSQGLTQRGVHKAVQSALTKIEYLGEWIDLETAKERNWPAWADAIQAVHAPQSSSDISRAALPRERLAYDEFFAHQLTLA LARATRRRKPGLSSTGDGRLRAKVLTALPYTPTGAQTRTIKEIADDMAAPHRMSRLLQGDVGAGKTLVALMALLVAVEAG GQAVMMAPTSILAGQHYLNLKPLADHAGVVCEILTGADKGRERDAKLNALKRGDIHILVGTHAVFQDDVAFDDLRLAVVD EQHRFGVRERVRLSQKGEAADILVMTATPIPRTLSLAQYGDMDLSVLDEKPPGRTPVKTALISTARLDEVVDHMRRALDE GRQAYWVCPLVEESEVYDATAAEERFKMLRAAFGEGKVALIHGRMKPKEKDAIMAAFKAGETRVLVATTVIEVGVDVPNA SIMVIEQAENYGLAQLHQLRGRVGRGAADSTCLLMYRAPLGDTATRRLQVMRETEDGFRISEEDLAIRGAGDLIGTAQSG LPRFRVADMESQAALMALAQTDARALLTLDPALEGARGQSARVLLWLMEQDKAIRLLNVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 4e-151 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Jann_2503 | YP_510445.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 1e-109 | 44 |
