Gene Information

Name : Jann_2081 (Jann_2081)
Accession : YP_510023.1
Strain : Jannaschia sp. CCS1
Genome accession: NC_007802
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2089722 - 2090519 bp
Length : 798 bp
Strand : +
Note : -

DNA sequence : 
ATGATGGACCTGCACGTCGTTCCGCACCCGGCAATGCTCGATCCCGCAAGCCCCCTGGCTGTGCGGGGTTTGACAGTCTC
CTACGGCGAAAAACCGGCGCTTTTCTCGCTTGACGCCAGCTTCCCGGCGGGCGCGATGTCGGCGATCGTCGGACCCAATG
GCGCGGGGAAATCCACCTTCCTCAAGGCCGCATTGGGCCTGATCCCACGGGTGTCCGGCGAGGTGACTGTATTTGGCCGC
GACGTCGCCCGGGCGCGGGATCGCATCGCCTACGTGCCTCAGCGCGCCAGCGTGGACTGGGACTTTCCCACCACGGCCAT
CGATGTCGTGCTGATGGGGCTCTACGGGCAAGTGGGCCTGTGGCGGCGGATCAGCGGTGCGCACAAGGCGCGCGCGCGGG
CGTGTCTGGACCGGGTTGGCATGGCCGATTTTGCGGATCGCCAGATTGGCCAGCTGTCCGGTGGCCAGCAACAGCGGGTG
TTTCTGGCCCGTGCTTTGGCGCAGGACGCGGACCTGTTCCTGCTGGATGAGCCGTTCGCGGGCGTCGACGCCGCCACCGA
GGCTGCGATCATCGACGTGTTGAAATCCCTCAAGGCCGAGGGGCGCAGCGTTGTCGCGGTCCACCATGACCTCTCGACCG
TCACCACCTATTTCGACCATGTATTGCTGATCAACCTACGCCAGATCGCGGAAGGCCCCGTGGACAAAGCCTTCACGGCC
GAGACGTTGACCGAGACCTATGGCGGTCGCCTTGGCACGGTCCAGATCGACGGGCTGGCCCTGACGGCTGCGACCTAG

Protein sequence : 
MMDLHVVPHPAMLDPASPLAVRGLTVSYGEKPALFSLDASFPAGAMSAIVGPNGAGKSTFLKAALGLIPRVSGEVTVFGR
DVARARDRIAYVPQRASVDWDFPTTAIDVVLMGLYGQVGLWRRISGAHKARARACLDRVGMADFADRQIGQLSGGQQQRV
FLARALAQDADLFLLDEPFAGVDAATEAAIIDVLKSLKAEGRSVVAVHHDLSTVTTYFDHVLLINLRQIAEGPVDKAFTA
ETLTETYGGRLGTVQIDGLALTAAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 1e-41 46
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 8e-42 46
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 6e-41 44
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 9e-40 44
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 9e-40 44
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-40 44
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 7e-41 44
unnamed CAD33755.1 putative ABC transporter ATP-binding protein Virulence PAI I 536 Protein 3e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Jann_2081 YP_510023.1 ABC transporter-like protein BAC0400 Protein 5e-59 60
Jann_2081 YP_510023.1 ABC transporter-like protein BAC0350 Protein 3e-41 44
Jann_2081 YP_510023.1 ABC transporter-like protein BAC0440 Protein 3e-42 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Jann_2081 YP_510023.1 ABC transporter-like protein VFG0526 Protein 3e-41 44
Jann_2081 YP_510023.1 ABC transporter-like protein VFG1496 Protein 2e-32 41