Gene Information

Name : Jann_1661 (Jann_1661)
Accession : YP_509603.1
Strain : Jannaschia sp. CCS1
Genome accession: NC_007802
Putative virulence/resistance : Resistance
Product : major facilitator transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2814
EC number : -
Position : 1644460 - 1645680 bp
Length : 1221 bp
Strand : -
Note : -

DNA sequence :
ATGCGCCTGCCCACCCTCTTCATCCTGATCACGGTCACCATCGACGCGATGGGCATCGGCCTGATCCTGCCCGTCATGCC
CGACCTGATCACCGAGGTGCGCGGCGCGGGTCTTGCCAACGCGGCCCTTTGGGGCGGCCTCCTATCCACCACCTACGCGG
TAATGCAATTCCTCTGCTCCCCCACCCTCGGCAACCTGTCGGACAGGTTTGGCCGCCGCCCCATCCTCCTGATATCGCTG
GCGGTTCTCGCCGCCGACTACGTCGTGATGAGCCTCGCCCACACCATCTGGATCCTGATCGCGGGCCGCATCGTGGCGGG
CATCGCGGCGGGCACGCACGCCACGGCGCTGGCCTATATGGCCGACATCTCTCCGCCCGAAAAACGCGCCCAGAACTTCG
GCCTGATCTCTGCGGGTTTCGGCATAGGCTTCGTCCTCGGTCCCCTCGTCGCAGCGTTTCTGGGCGAGTTCGACCCGCGC
GCGCCCTTTGTGGCCGCTGCGTGCCTGGCCGCTGCCAACTTCGCGTTCGGATACTTCATCCTGCCCGAAAGCCTGCCCAA
GGATCGCCGCCGCCCGTTCCAGTGGCGCCGTGCCAACCCGGCGGGCGGGCTTTTGCAAATTGGCGCTCTGCCCGGCGTGC
GCCTGTTGCTGATGGTGATGCTGGCCTACCAGATCGCCAACTTCGTCTACCCCGCAATCTGGGCCTATTACGGCCAGGCA
GCGTTTGGCTGGACGTCACGCATGATCGGCCTGTCGCTGACCGTCTACGGGATTTCGATGGCCGTCGTGCAGGGCGGGCT
GATCCGCCTGGTCCTCCCGCGATTGGGCGAGACGCGAACAGTCTATTGGGGCCTGATCCTCAATGTGTGCTGCCTGATCT
GCTATGGCCTGGCGACCGAGGCCTGGATGATCTGGGCCCTGATCCCGGTCTCCGCGATGGGTGCAGTGGTCGCCCCGGCC
ATGCAAGGCGTGATGAGCCGGGCGGCAGGGGCCGACCAGCAGGGAGAGCTTCAGGGCGTCCTCGCCTCCATTTCATCCCT
GTCGATGATCCTCAGCCCGATCGTCATGACGCAGGCCTTCTTCTGGTTCACCCGGGACGAGGCCATTCTGCGCCTGCCCG
GCGCGCCGTTTCTTGTGGCCGCCGTCCTCATGGCCGGTGCCTTCGCCATCTTCGCCATCCGCCACGGACGCGCTCGCCCG
ACCCCGCGAGAGGCCGCCTAG

Protein sequence :
MRLPTLFILITVTIDAMGIGLILPVMPDLITEVRGAGLANAALWGGLLSTTYAVMQFLCSPTLGNLSDRFGRRPILLISL
AVLAADYVVMSLAHTIWILIAGRIVAGIAAGTHATALAYMADISPPEKRAQNFGLISAGFGIGFVLGPLVAAFLGEFDPR
APFVAAACLAAANFAFGYFILPESLPKDRRRPFQWRRANPAGGLLQIGALPGVRLLLMVMLAYQIANFVYPAIWAYYGQA
AFGWTSRMIGLSLTVYGISMAVVQGGLIRLVLPRLGETRTVYWGLILNVCCLICYGLATEAWMIWALIPVSAMGAVVAPA
MQGVMSRAAGADQQGELQGVLASISSLSMILSPIVMTQAFFWFTRDEAILRLPGAPFLVAAVLMAGAFAIFAIRHGRARP
TPREAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetA(A) AGK07027.1 TetA(A) Not tested SGI1 Protein 3e-41 42
tetA(A) AGK07085.1 TetA(A) Not tested SGI1 Protein 3e-41 42
tetA YP_006098396.1 tetracycline resistance protein Not tested Tn2411 Protein 4e-41 42
tetA(A) ACK44537.1 TetA(A) Not tested SGI1 Protein 3e-41 42
tetA CAJ77066.1 Tetracycline resistance protein Not tested AbaR1 Protein 3e-41 42
tetA(A) ACN81011.1 TetA(A) Not tested AbaR5 Protein 4e-41 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Jann_1661 YP_509603.1 major facilitator transporter NC_011586.7045189.p0 Protein 9e-37 43
Jann_1661 YP_509603.1 major facilitator transporter Y19114.gene.p01 Protein 5e-40 42
Jann_1661 YP_509603.1 major facilitator transporter AY264780.2.gene3.p01 Protein 7e-43 42
Jann_1661 YP_509603.1 major facilitator transporter X75761.gene.p01 Protein 5e-41 42
Jann_1661 YP_509603.1 major facilitator transporter NC_010410.6002597.p0 Protein 2e-41 42
Jann_1661 YP_509603.1 major facilitator transporter CP001485.1.gene2821. Protein 2e-41 42
Jann_1661 YP_509603.1 major facilitator transporter AF534183.gene.p01 Protein 2e-41 42