Gene Information

Name : Jann_1542 (Jann_1542)
Accession : YP_509484.1
Strain : Jannaschia sp. CCS1
Genome accession: NC_007802
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator, AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 1512410 - 1512640 bp
Length : 231 bp
Strand : -
Note : -

DNA sequence : 
ATGTCCCACCCAGACCGCATCGTTCGCCTCACAACCGTCCTCGACCGCACCGGCCTGTCCCGATCCACCCTCTACCGCAA
AATCGCAGAAGGGACCTTTCCCGCGCAGCTCCGGATCAGCGTTCATGGCGCAGGCTGGCGGGAGTCTGAGATTGGCGAAT
GGATCGACAATCCGGCAGGGTGGAGGCCTCAAAACTCAACCGTAGAAACGCTCAAAAAGCGTGAGCACTAA

Protein sequence : 
MSHPDRIVRLTTVLDRTGLSRSTLYRKIAEGTFPAQLRISVHGAGWRESEIGEWIDNPAGWRPQNSTVETLKKREH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 3e-10 42
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 2e-10 42
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 3e-10 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Jann_1542 YP_509484.1 phage transcriptional regulator, AlpA VFG1118 Protein 8e-11 42