Gene Information

Name : glnA (ECH_0089)
Accession : YP_506919.1
Strain : Ehrlichia chaffeensis Arkansas
Genome accession: NC_007799
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 80016 - 81428 bp
Length : 1413 bp
Strand : -
Note : identified by similarity to SP:P05457; match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653

DNA sequence :
ATGTTCCTTTCTATAGAGGATACTTTAAACTACATAAAAAAAAATGCAATAAATTTTATTGATCTAAGGTTTACAGATTC
TAATGGTAAATGGCATCACATAACACGTAGTGCAGAAACTATAAATGCACAAGTGCTTTTAGCAGGAGTTAACTTTGATA
GTTCATCAATTCCTGGGTGGCAATCAATAGAAAAATCAGACATGATATTACTACCAGATGTTAGTACAGCTTTCATGGAT
CCATTTTCTGCTCAATCAACATTGGTTATATTGTGTAATATAGTAGATCCTTATAAGCAATCTCAGTACTCTAAAGATCC
ACGGTATATAGCACAAAAAGCATATAAATATATGCTATCTACAGGTATTGCTGATAAGTGTTATTTCGGCCCAGAAGTAG
AGTTCTTTATATTTGATAACGCACAGTTTTATGCAGGAATGTATAACTCTTACTTCAAAATAGATTCTGCAGAACACGAT
ATTTTATTTCAAAAAAGAGAATTTTCCAACAATAGCCATCGCCCAAAAGTTAAAGGTGGTTATATGCCTACTCCTCCTAT
TGATTCGTTACATGACATTCGATCAGAAATGTTAACAATGTTCAAAGAAGTAGGTATTATACCTTTAATACATCACCATG
AAGTTGCTGCATCACAATGTGAAGTTGGATTTCAACATGATGAATTACTACTCAGTGCAGACAATGTGCAAAAGTGTAAG
TATATAGTACATGGAGTTGCATCATCTTATGGTAAAACTGCAACCTTTATGCCAAAACCAGTTATAAAAGATAACGGTAG
CGGTATGCATTGTCATCAATCTTTGTGGAAAGACAACGTTAACATTTTTGTCAATCCTGATGGTAGTATATCAGAAACCT
GTTTATACTACATAGGTGGAATTATTAAATATGGAAAAGCTATTAATGCATTCACAAATCCTTCAACAAATAGTTATAAA
AGGTTAGTACCTCATTTTGAAGCTCCAACTTGGTTGACTTATTCATATGAAAACAGATCTTCTGCCATCCGCATACCGTA
TGTACCAAAAAATGACCTCAATGCTAAAAGAATAGAAGCACGGTTCCCAGATCCACTGGCAAATCCATACCTATGTTTCT
CTGCACAGCTAATGGCTGGGTTATACGGAATACAAAATAAAATTCATCCTGGACCAGCAATAGACAAAAATCTGTACTCA
CTAGATAAGGAGGAGCTACAACAATTCACTTCTGTAGCAAGCTCTCTTGAAGAGGCACTGGACTCCCTAGATAATAATAG
AGAATTTCTGCTAGTAGGAGATGTGTTTACCAATGATCAAATTGATGCATATATAAATCTCAAAATGCTAGAAGTAAAGG
ACCTACAGCTGCATCCACACCCTATCGAATTTATAAATTACTATAGCTCTTAA

Protein sequence :
MFLSIEDTLNYIKKNAINFIDLRFTDSNGKWHHITRSAETINAQVLLAGVNFDSSSIPGWQSIEKSDMILLPDVSTAFMD
PFSAQSTLVILCNIVDPYKQSQYSKDPRYIAQKAYKYMLSTGIADKCYFGPEVEFFIFDNAQFYAGMYNSYFKIDSAEHD
ILFQKREFSNNSHRPKVKGGYMPTPPIDSLHDIRSEMLTMFKEVGIIPLIHHHEVAASQCEVGFQHDELLLSADNVQKCK
YIVHGVASSYGKTATFMPKPVIKDNGSGMHCHQSLWKDNVNIFVNPDGSISETCLYYIGGIIKYGKAINAFTNPSTNSYK
RLVPHFEAPTWLTYSYENRSSAIRIPYVPKNDLNAKRIEARFPDPLANPYLCFSAQLMAGLYGIQNKIHPGPAIDKNLYS
LDKEELQQFTSVASSLEEALDSLDNNREFLLVGDVFTNDQIDAYINLKMLEVKDLQLHPHPIEFINYYSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 9e-88 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_506919.1 glutamine synthetase, type I VFG1399 Protein 9e-82 45