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Name : rplS (NSE_0895) Accession : YP_506761.1 Strain : Neorickettsia sennetsu Miyayama Genome accession: NC_007798 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 799555 - 799917 bp Length : 363 bp Strand : - Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGGGTATCTTAGCTAAATTTAATGAGGCTCAGAGGAAAGCTCTTTCTGAAGGTAGGAACTATCCCGAATTCAGAGCTGG TTACACTATGAGTGTAGAGTTTTATGTCCAAGGTACCTCTGGACGTACTCAAGTTTTTAAGGGTCTTTGTATTGGAAAGA GTAACAAGGGTGTGCATTCTTCTTTCACTTTGCGTAAGCTCTCTGTGCACGATGTTTATGTCGAGCGTACCTTTCGTTTG TACTGGCCTTCAATCAAGTCCATTTCGGTTGAGAGAGAGGGTAAAGTGAGAAGGGCTAAGCTTTACTATATTAGGGCTCT AACTGGAAAGGCAACGAGAATAAGGAAAGAATATCGTAGTTAA Protein sequence : MGILAKFNEAQRKALSEGRNYPEFRAGYTMSVEFYVQGTSGRTQVFKGLCIGKSNKGVHSSFTLRKLSVHDVYVERTFRL YWPSIKSISVEREGKVRRAKLYYIRALTGKATRIRKEYRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 4e-16 | 45 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 5e-15 | 44 |
